Zinc in PDB 6tap: Structure of the DARC1 Capsid

The binding sites of Zinc atom in the Structure of the DARC1 Capsid (pdb code 6tap). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of the DARC1 Capsid, PDB code: 6tap:

Zinc binding site 1 out of 1 in the Structure of the DARC1 Capsid


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of the DARC1 Capsid within 5.0Å range: probe atom residue distance (Å) B Occ E:Zn301 b:93.9 occ:1.00 NE2 E:HIS235 2.1 96.5 1.0 SG E:CYS227 2.3 0.7 1.0 SG E:CYS230 2.3 0.7 1.0 SG E:CYS240 2.3 0.8 1.0 CD2 E:HIS235 3.0 87.4 1.0 CE1 E:HIS235 3.1 77.3 1.0 CB E:CYS227 3.3 1.0 1.0 CB E:CYS230 3.4 90.0 1.0 CB E:CYS240 3.5 0.1 1.0 CG E:HIS235 4.1 64.1 1.0 ND1 E:HIS235 4.1 57.9 1.0 N E:CYS230 4.2 72.3 1.0 CA E:CYS240 4.3 0.7 1.0 CA E:CYS230 4.3 83.4 1.0 CA E:CYS227 4.7 94.3 1.0 O E:PHE232 4.7 63.1 1.0 O E:THR236 4.8 0.4 1.0 O E:ASN239 4.9 96.2 1.0

S.Erlendsson, D.R.Morado, H.B.Cullen, C.Feschotte, J.D.Shepherd, J.A.G.Briggs. Structures of Virus-Like Capsids Formed By the Drosophila Neuronal Arc Proteins Nat.Neurosci. 2020.
ISSN: ISSN 1097-6256
DOI: 10.1038/S41593-019-0569-Y