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Zinc in PDB, part 504 (files: 20121-20160), PDB 8fyh-8gbl

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 20121-20160 (PDB 8fyh-8gbl).
  1. 8fyh (Zn: 14) - G4 Rna-Mediated PRC2 Dimer
  2. 8fzr (Zn: 1) - Cryoem Structure of Yeast Arginyltransferase 1 (ATE1)
  3. 8g0h (Zn: 4) - Human PARP1 DELTAV687-E688 Bound to UKTT5 (Compound 10) and to A Dna Double Strand Break.
  4. 8g10 (Zn: 2) - Structure of Ternary Complex of Cgas with Dsdna and Bound Itp and Gtp
    Other atoms: Mg (2);
  5. 8g1j (Zn: 2) - Structure of Ternary Complex of Cgas with Dsdna and Bound Atp and Itp
    Other atoms: Mg (2);
  6. 8g1z (Zn: 1) - Crystal Structure of Danio Rerio Histone Deacetylase 6 Catalytic Domain 2 Complexed with Inhibitor MZ317
    Other atoms: K (2);
  7. 8g20 (Zn: 2) - Crystal Structure of Danio Rerio Histone Deacetylase 6 Catalytic Domain 2 Complexed with Inhibitor MZ327
    Other atoms: K (4);
  8. 8g23 (Zn: 2) - Structure of Ternary Complex of Cgas with Dsdna and Bound Pppipa
    Other atoms: Mg (2);
  9. 8g2l (Zn: 4) - Horse Liver Alcohol Dehydrogense His-51 Gln Form Complexed with Nad+ and 2,2,2-Trifluoroethanol
    Other atoms: F (12);
  10. 8g2p (Zn: 2) - Structure of Ternary Complex of Cgas with Dsdna and Bound Atp and Gtp
    Other atoms: Mg (2);
  11. 8g2q (Zn: 2) - Structure of Ternary Complex of Mouse Cgas with Dsdna and Bound Gtp
    Other atoms: Mg (2);
  12. 8g2s (Zn: 4) - Horse Liver Alcohol Dehydrogense His-51-Gln Form Complexed with Nad+ and Capric Acid
  13. 8g2x (Zn: 4) - Horse Liver Alcohol Dehydrogense His-51-Gln Form Complexed with Nad+ and Pyrazole
  14. 8g39 (Zn: 4) - Horse Liver Alcohol Dehydrogense His-51-Gln Form Complexed with Nadh and N-Cyclohexylformamide
  15. 8g3h (Zn: 1) - Structure of Cobalamin-Dependent Methionine Synthase (Meth) in A Resting State
    Other atoms: Co (1);
  16. 8g41 (Zn: 4) - Horse Liver Alcohol Dehydrogense His-51-Gln Form Complexed with Nadh
  17. 8g43 (Zn: 3) - Structure of HDAC6 Zinc-Finger Ubiquitin Binding Domain in Complex with 3-(3-(2-(Methylamino)-2-Oxoethyl)-4-Oxo-3,4-Dihydroquinazolin-2- Yl)Propanoic Acid
  18. 8g44 (Zn: 3) - Structure of HDAC6 Zinc-Finger Ubiquitin Binding Domain in Complex with 3-(3-(2-(Benzylamino)-2-Oxoethyl)-4-Oxo-3,4-Dihydroquinazolin-2- Yl)Propanoic Acid
  19. 8g45 (Zn: 3) - Structure of HDAC6 Zinc-Finger Ubiquitin Binding Domain in Complex with Sgc-UBD253 Chemical Probe
    Other atoms: Cl (1);
  20. 8g46 (Zn: 1) - Cryo-Em Structure of DDB1DELTAB-DDA1-DCAF16-BRD4(BD2)-MMH2
  21. 8g4v (Zn: 4) - Horse Liver Alcohol Dehydrogense His-51-Gln Form Complexed with Nad+ and 2,3,4,5,6-Pentafluorobenzyl Alcohol
    Other atoms: F (10);
  22. 8g62 (Zn: 3) - Papain-Like Protease of Sars Cov-2 in Complex with Remodilin Ncgc 390004
    Other atoms: Na (2); Cl (6);
  23. 8g66 (Zn: 2) - Structure with SJ3149
  24. 8g6d (Zn: 6) - Hsv-1 Nuclear Egress Complex (Sup; UL31-R229L)
  25. 8g6r (Zn: 2) - Porcine Epidemic Diarrhea Virus Core Polymerase Complex
  26. 8g6x (Zn: 2) - Structure of Wt E.Coli Ribosome 50S Subunit with Complexed with Mrna, P-Site Fmet-Nh-Trnafmet and A-Site Meta-Aminobenzoic Acid Charged Nh- Trnaphe
    Other atoms: Mg (223); K (7);
  27. 8g6y (Zn: 2) - Structure of Wt E.Coli Ribosome 50S Subunit with Complexed with Mrna, P-Site Fmet-Nh-Trnafmet and A-Site 3-Aminopyridine-4-Carboxylic Acid Charged Nh-Trnaphe
    Other atoms: Mg (231); K (15);
  28. 8g7f (Zn: 2) - Crystal Structure of Fosb From Bacillus Cereus with Zinc and 1- Hydroxypropylphosphonic Acid
    Other atoms: Mg (2);
  29. 8g7g (Zn: 2) - Crystal Structure of Fosb From Bacillus Cereus with Zinc and (1- Hydroxy-2-Methylpropyl)Phosphonic Acid
    Other atoms: Mg (2);
  30. 8g7h (Zn: 2) - Crystal Structure of Fosb From Bacillus Cereus with Zinc and (1- Hydroxypropan-2-Yl)Phosphonic Acid
    Other atoms: Mg (2);
  31. 8g7i (Zn: 2) - Crystal Structure of Fosb From Bacillus Cereus with Zinc and Sulfate
    Other atoms: Mg (2);
  32. 8g7t (Zn: 2) - Cryo-Em Structure of Rnp End
  33. 8g7u (Zn: 2) - Cryo-Em Structure of Rnp End 2
  34. 8g7v (Zn: 2) - Cryo-Em Structure of Rnp Inter
  35. 8g99 (Zn: 2) - Partial Auto-Inhibitory Complex of Xenopus Laevis Dna Polymerase Alpha-Primase
    Other atoms: Fe (4);
  36. 8g9f (Zn: 3) - Complete Auto-Inhibitory Complex of Xenopus Laevis Dna Polymerase Alpha-Primase
    Other atoms: Fe (4);
  37. 8ga8 (Zn: 2) - Structure of the Yeast (Hdac) RPD3L Complex
  38. 8gao (Zn: 1) - Bacteriophage T4 Stalled Primosome with Mutant GP41-E227Q
    Other atoms: Mg (5);
  39. 8gap (Zn: 1) - Structure of LARP7 Protein P65-Telomerase Rna Complex in Telomerase
  40. 8gbl (Zn: 2) - Structure of Apo Human SIRT5
Page generated: Wed Nov 13 13:39:47 2024

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