Zinc in PDB 8eex: CAS7-11 in Complex with CSX29

The binding sites of Zinc atom in the CAS7-11 in Complex with CSX29 (pdb code 8eex). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 4 binding sites of Zinc where determined in the CAS7-11 in Complex with CSX29, PDB code: 8eex:
Jump to Zinc binding site number: 1; 2; 3; 4;

Zinc binding site 1 out of 4 in the CAS7-11 in Complex with CSX29


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of CAS7-11 in Complex with CSX29 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn2001 b:119.7 occ:1.00 SG A:CYS86 2.3 74.8 1.0 SG A:CYS126 2.3 64.0 1.0 SG A:CYS123 2.3 73.9 1.0 SG A:CYS115 2.3 87.0 1.0 CB A:CYS123 3.5 70.5 1.0 CB A:CYS126 3.6 63.5 1.0 CB A:CYS86 3.6 66.4 1.0 CB A:CYS115 3.8 81.2 1.0 N A:CYS123 3.9 67.1 1.0 N A:CYS115 4.2 75.8 1.0 CA A:CYS123 4.2 67.5 1.0 N A:CYS86 4.3 67.2 1.0 CA A:CYS86 4.5 64.3 1.0 N A:CYS126 4.5 62.9 1.0 CA A:CYS126 4.6 61.3 1.0 CA A:CYS115 4.7 77.9 1.0 O A:CYS123 4.7 69.2 1.0 C A:CYS123 4.7 67.2 1.0 CD1 A:TYR122 4.8 80.3 1.0 C A:CYS86 4.8 63.9 1.0 O A:CYS86 4.9 64.0 1.0 NH2 A:ARG131 5.0 67.8 1.0

Zinc binding site 2 out of 4 in the CAS7-11 in Complex with CSX29


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of CAS7-11 in Complex with CSX29 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn2002 b:99.9 occ:1.00 SG A:CYS463 2.3 67.3 1.0 SG A:CYS474 2.3 34.9 1.0 SG A:CYS477 2.3 40.9 1.0 CB A:CYS463 3.1 50.6 1.0 SG A:CYS472 3.5 31.3 1.0 CB A:CYS477 3.8 24.8 1.0 CB A:CYS474 3.9 33.1 1.0 N A:CYS477 4.2 30.9 1.0 CE B:MET620 4.4 61.7 1.0 CA A:CYS463 4.5 48.1 1.0 CA A:CYS477 4.5 18.9 1.0 CB A:CYS472 4.5 36.3 1.0 CB A:THR476 4.7 25.4 1.0 CA A:CYS474 5.0 27.2 1.0

Zinc binding site 3 out of 4 in the CAS7-11 in Complex with CSX29


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of CAS7-11 in Complex with CSX29 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn2003 b:102.6 occ:1.00 ND1 A:HIS703 2.1 51.3 1.0 SG A:CYS706 2.3 72.8 1.0 SG A:CYS708 2.3 53.8 1.0 SG A:CYS711 2.3 57.9 1.0 CE1 A:HIS703 2.9 48.9 1.0 CG A:HIS703 3.2 52.4 1.0 CB A:CYS706 3.4 67.7 1.0 CB A:CYS708 3.5 44.2 1.0 CB A:HIS703 3.7 57.4 1.0 CB A:CYS711 3.7 46.0 1.0 CA A:HIS703 3.8 58.7 1.0 N A:CYS708 3.9 53.9 1.0 NE2 A:HIS703 4.1 45.8 1.0 N A:CYS711 4.1 39.0 1.0 CA A:CYS708 4.2 46.2 1.0 CD2 A:HIS703 4.3 48.2 1.0 C A:CYS706 4.5 65.8 1.0 CA A:CYS711 4.5 38.3 1.0 CA A:CYS706 4.6 66.2 1.0 N A:HIS703 4.7 57.4 1.0 N A:GLU707 4.7 56.2 1.0 C A:CYS708 4.7 44.7 1.0 CD1 A:LEU701 4.7 50.8 1.0 CB A:LEU710 4.8 36.2 1.0 C A:HIS703 4.8 62.7 1.0 O A:CYS708 4.9 50.4 1.0 O A:CYS706 4.9 72.6 1.0

Zinc binding site 4 out of 4 in the CAS7-11 in Complex with CSX29


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 4 of CAS7-11 in Complex with CSX29 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn2004 b:92.1 occ:1.00 SG A:CYS1312 2.3 41.9 1.0 SG A:CYS1342 2.3 44.3 1.0 SG A:CYS965 2.3 46.6 1.0 SG A:CYS1345 2.3 52.0 1.0 CB A:CYS1345 3.5 27.5 1.0 CB A:CYS965 3.6 36.5 1.0 CB A:CYS1342 3.6 25.8 1.0 CB A:CYS1312 3.8 31.9 1.0 N A:CYS1312 4.0 37.6 1.0 N A:CYS1342 4.0 21.0 1.0 N A:CYS965 4.3 27.2 1.0 N A:CYS1345 4.3 30.0 1.0 CA A:CYS1342 4.4 19.3 1.0 CA A:CYS965 4.5 22.0 1.0 CA A:CYS1345 4.5 25.4 1.0 CA A:CYS1312 4.5 28.4 1.0 C A:CYS1342 4.9 28.1 1.0 O A:CYS1342 4.9 41.8 1.0 CG A:ARG967 4.9 33.0 1.0

J.Strecker, F.E.Demircioglu, D.Li, G.Faure, M.E.Wilkinson, J.S.Gootenberg, O.O.Abudayyeh, H.Nishimasu, R.K.Macrae, F.Zhang. Rna-Activated Protein Cleavage with A Crispr-Associated Endopeptidase. Science V. 378 874 2022.
ISSN: ESSN 1095-9203
PubMed: 36423276
DOI: 10.1126/SCIENCE.ADD7450