Zinc in PDB 8e9i: Mycobacterial Respiratory Complex I, Semi-Inserted Quinone

Enzymatic activity of Mycobacterial Respiratory Complex I, Semi-Inserted Quinone

All present enzymatic activity of Mycobacterial Respiratory Complex I, Semi-Inserted Quinone:
1.6.99.5;

Other elements in 8e9i:

The structure of Mycobacterial Respiratory Complex I, Semi-Inserted Quinone also contains other interesting chemical elements:

Iron (Fe) 32 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Mycobacterial Respiratory Complex I, Semi-Inserted Quinone (pdb code 8e9i). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Mycobacterial Respiratory Complex I, Semi-Inserted Quinone, PDB code: 8e9i:

Zinc binding site 1 out of 1 in 8e9i

Go back to Zinc Binding Sites List in 8e9i
Zinc binding site 1 out of 1 in the Mycobacterial Respiratory Complex I, Semi-Inserted Quinone


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Mycobacterial Respiratory Complex I, Semi-Inserted Quinone within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Zn502

b:91.8
occ:1.00
OE2 F:GLU372 1.8 59.8 1.0
SG F:CYS426 2.3 64.3 1.0
SG F:CYS334 2.3 62.5 1.0
NE2 F:HIS421 2.3 61.4 1.0
CD F:GLU372 2.6 59.8 1.0
OE1 F:GLU372 2.9 59.8 1.0
CB F:CYS426 2.9 64.3 1.0
CD2 F:HIS421 3.1 61.4 1.0
CB F:CYS334 3.3 62.5 1.0
CE1 F:HIS421 3.4 61.4 1.0
N F:ARG337 3.4 61.5 1.0
CB F:ARG337 3.6 61.5 1.0
CA F:ARG337 3.9 61.5 1.0
CA F:CYS426 3.9 64.3 1.0
CB F:VAL336 4.0 59.9 1.0
CG F:GLU372 4.0 59.8 1.0
C F:VAL336 4.2 59.9 1.0
CG F:HIS421 4.3 61.4 1.0
ND1 F:HIS421 4.4 61.4 1.0
CG1 F:VAL336 4.5 59.9 1.0
CA F:VAL336 4.5 59.9 1.0
CA F:CYS334 4.7 62.5 1.0
CG F:ARG337 4.7 61.5 1.0
N F:VAL336 4.8 59.9 1.0
N F:CYS426 4.8 64.3 1.0
CD F:ARG337 4.9 61.5 1.0
CB F:GLU372 4.9 59.8 1.0
CG2 F:VAL336 4.9 59.9 1.0
C F:CYS334 5.0 62.5 1.0
O F:CYS334 5.0 62.5 1.0
CA F:GLU372 5.0 59.8 1.0

Reference:

Y.Liang, A.Plourde, S.A.Bueler, J.Liu, P.Brzezinski, S.Vahidi, J.L.Rubinstein. Structure of Mycobacterial Respiratory Complex I Biorxiv 2022.
ISSN: ISSN 2692-8205
DOI: 10.1101/2022.10.04.510895
Page generated: Wed Oct 30 19:35:13 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy