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Zinc in PDB, part 302 (files: 12041-12080), PDB 5onk-5phh

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 12041-12080 (PDB 5onk-5phh).
  1. 5onk (Zn: 1) - Native Yndl
  2. 5onr (Zn: 1) - Alzheimer'S Amyloid-Beta Peptide Fragment 1-40 in Complex with Thermolysin
    Other atoms: Ca (4);
  3. 5ons (Zn: 1) - Crystal Structure of the Minimal Denr-MCTS1 Complex
  4. 5onx (Zn: 1) - Resting State Copper Nitrite Reductase Determined By Serial Femtosecond Rotation Crystallography
    Other atoms: Cu (2);
  5. 5ony (Zn: 1) - As-Isolated Resting State Copper Nitrite Reductase From Achromobacter Xylosoxidans
    Other atoms: Cu (2);
  6. 5ool (Zn: 3) - Structure of A Native Assembly Intermediate of the Human Mitochondrial Ribosome with Unfolded Interfacial Rrna
    Other atoms: Mg (92);
  7. 5oom (Zn: 2) - Structure of A Native Assembly Intermediate of the Human Mitochondrial Ribosome with Unfolded Interfacial Rrna
    Other atoms: Mg (49);
  8. 5op6 (Zn: 1) - Factor Inhibiting Hif (Fih) in Complex with Zinc and GSK128863
  9. 5op8 (Zn: 1) - Factor Inhibiting Hif (Fih) in Complex with Zinc and Molidustat
  10. 5opc (Zn: 1) - Factor Inhibiting Hif (Fih) in Complex with Zinc and Vadadustat
    Other atoms: Cl (2);
  11. 5opj (Zn: 1) - Beta-L-Arabinofuranosidase
  12. 5opz (Zn: 2) - Crystal Structure of Serratia Marcescens L-Ala D-Glu Endopeptidase Chix
    Other atoms: Cl (1);
  13. 5oq1 (Zn: 2) - Crystal Structure of Serratia Marcescens Chix (Used As Mr Model For Superior Pdb 5OPZ)
    Other atoms: Cl (1);
  14. 5oqd (Zn: 12) - PHD2 and Winged-Helix Domain of Polycomblike
  15. 5oqj (Zn: 16) - Structure of Yeast Transcription Pre-Initiation Complex with Tfiih
    Other atoms: Mg (1); Fe (4);
  16. 5oqm (Zn: 16) - Structure of Yeast Transcription Pre-Initiation Complex with Tfiih and Core Mediator
    Other atoms: Mg (1); Fe (4);
  17. 5oqw (Zn: 2) - Xiap in Complex with Small Molecule
    Other atoms: F (2); Na (1);
  18. 5ot2 (Zn: 8) - Rna Polymerase II Elongation Complex in the Presence of 3D-Napht-A
    Other atoms: Mg (1); Br (1);
  19. 5ow3 (Zn: 3) - Crystal Structure of A C-Terminally Truncated Trimeric Ectodomain of the Arabidopsis Thaliana Gamete Fusion Protein HAP2
  20. 5ows (Zn: 2) - Crystal Structure of TNKS2 in Complex with 2-[4-(4-Methyl-2- Oxoimidazolidin-4-Yl)Phenyl]-3,4-Dihydroquinazolin-4-One
  21. 5owt (Zn: 2) - Crystal Structure of TNKS2 in Complex with (5S)-5-Methyl-5-[4-(4-Oxo- 3,4-Dihydroquinazolin-2-Yl)Phenyl]Imidazolidine-2,4-Dione
  22. 5oy3 (Zn: 1) - The Structural Basis of the Histone Demethylase KDM6B Histone 3 Lysine 27 Specificity
    Other atoms: Fe (1);
  23. 5ph0 (Zn: 1) - Pandda Analysis Group Deposition -- Crystal Structure of JMJD2D in Complex with N09484A
    Other atoms: F (3); Ni (1); Mg (1);
  24. 5ph1 (Zn: 1) - Pandda Analysis Group Deposition -- Crystal Structure of JMJD2D in Complex with N09449A
    Other atoms: F (1); Ni (1);
  25. 5ph2 (Zn: 1) - Pandda Analysis Group Deposition -- Crystal Structure of JMJD2D in Complex with N09597A
    Other atoms: Ni (1);
  26. 5ph3 (Zn: 1) - Pandda Analysis Group Deposition -- Crystal Structure of JMJD2D in Complex with N09575A
    Other atoms: Ni (1);
  27. 5ph4 (Zn: 1) - Pandda Analysis Group Deposition -- Crystal Structure of JMJD2D in Complex with N09597A
    Other atoms: Ni (1);
  28. 5ph5 (Zn: 1) - Pandda Analysis Group Deposition -- Crystal Structure of JMJD2D in Complex with N09724A
    Other atoms: Ni (1); Br (1);
  29. 5ph6 (Zn: 1) - Pandda Analysis Group Deposition -- Crystal Structure of JMJD2D in Complex with N09736A
    Other atoms: Ni (1);
  30. 5ph7 (Zn: 1) - Pandda Analysis Group Deposition -- Crystal Structure of JMJD2D in Complex with N09504A
    Other atoms: Ni (1);
  31. 5ph8 (Zn: 1) - Pandda Analysis Group Deposition -- Crystal Structure of JMJD2D in Complex with N09552A
    Other atoms: Ni (1);
  32. 5ph9 (Zn: 1) - Pandda Analysis Group Deposition -- Crystal Structure of JMJD2D in Complex with N09701A
    Other atoms: Ni (1);
  33. 5pha (Zn: 1) - Pandda Analysis Group Deposition -- Crystal Structure of JMJD2D in Complex with N09398A
    Other atoms: Ni (1);
  34. 5phb (Zn: 1) - Pandda Analysis Group Deposition -- Crystal Structure of JMJD2D in Complex with N09447A
    Other atoms: Ni (1);
  35. 5phc (Zn: 1) - Pandda Analysis Group Deposition -- Crystal Structure of JMJD2D in Complex with N09649A
    Other atoms: Ni (1);
  36. 5phd (Zn: 1) - Pandda Analysis Group Deposition -- Crystal Structure of JMJD2D in Complex with N09419A
    Other atoms: Ni (1);
  37. 5phe (Zn: 1) - Pandda Analysis Group Deposition -- Crystal Structure of JMJD2D in Complex with N09453A
    Other atoms: Ni (1);
  38. 5phf (Zn: 1) - Pandda Analysis Group Deposition -- Crystal Structure of JMJD2D in Complex with N09688A
    Other atoms: Ni (1);
  39. 5phg (Zn: 1) - Pandda Analysis Group Deposition -- Crystal Structure of JMJD2D in Complex with N09689A
    Other atoms: F (1); Ni (1);
  40. 5phh (Zn: 1) - Pandda Analysis Group Deposition -- Crystal Structure of JMJD2D in Complex with N09457A
    Other atoms: Ni (1);
Page generated: Tue Feb 25 12:01:25 2025

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