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Zinc in PDB, part 302 (files: 12041-12080), PDB 5ojh-5ph3

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 12041-12080 (PDB 5ojh-5ph3).
  1. 5ojh (Zn: 1) - Crystal Structure of the Extramembrane Domain of the Cellulose Biosynthetic Protein Bcsg From Salmonella Typhimurium
  2. 5ojj (Zn: 8) - Crystal Structure of the Zn-Bound Ubiquitin-Conjugating Enzyme UBE2T
  3. 5ojn (Zn: 1) - Sirtuin 4 From Xenopus Tropicalis in Complex with Thioacetyl-Adp- Ribose
  4. 5ojo (Zn: 2) - Sirtuin 5 From Danio Rerio in Complex with 3-Hydroxy-3-Methylglutaryl- CPS1 Peptide
    Other atoms: Na (1);
  5. 5ol0 (Zn: 2) - Structure of Leishmania Infantum Silent Information Regulator 2 Related Protein 1 (LISIR2RP1) in Complex with Acetylated P53 Peptide
  6. 5olb (Zn: 2) - Crystal Structure of Autotaxin in Complex with Pf-8380
    Other atoms: K (1); Ca (2); Cl (3); Na (2);
  7. 5olm (Zn: 8) - TRIM21
  8. 5olt (Zn: 1) - Crystal Structure of the Extramembrane Domain of the Cellulose Biosynthetic Protein Bcsg From Salmonella Typhimurium
  9. 5om9 (Zn: 3) - Crystal Structure of the Human Carboxypeptidase A1 in Complex with A Thiirane Mechanism-Based Inhibitor
  10. 5omw (Zn: 2) - Mutant T252A of E. Coli Leucyl-Trna Synthetase, Trna(Leu) and Leucyl- Adenylate Analogue in the Aminoacylation Conformation
    Other atoms: Mg (2);
  11. 5on2 (Zn: 2) - Quaternary Complex of Mutant T252A of E. Coli Leucyl-Trna Synthetase with Trna(Leu), Leucyl-Adenylate Analogue, and Post-Transfer Editing Analogue of Norvaline in the Aminoacylation Conformation
    Other atoms: Mg (2);
  12. 5on3 (Zn: 1) - Quaternary Complex of Mutant T252A of E. Coli Leucyl-Trna Synthetase with Trna(Leu), Leucyl-Adenylate Analogue, and Post-Transfer Editing Analogue of Leucine in the Aminoacylation Conformation
  13. 5onh (Zn: 2) - Quaternary Complex of Wild Type E. Coli Leucyl-Trna Synthetase with Trna(Leu), Leucyl-Adenylate Analogue, and Post-Transfer Editing Analogue of Norvaline in the Aminoacylation Conformation
    Other atoms: Mg (2);
  14. 5onj (Zn: 1) - Yndl in Complex with 5 Amino Acid (Pga) Complex
  15. 5onk (Zn: 1) - Native Yndl
  16. 5onr (Zn: 1) - Alzheimer'S Amyloid-Beta Peptide Fragment 1-40 in Complex with Thermolysin
    Other atoms: Ca (4);
  17. 5ons (Zn: 1) - Crystal Structure of the Minimal Denr-MCTS1 Complex
  18. 5onx (Zn: 1) - Resting State Copper Nitrite Reductase Determined By Serial Femtosecond Rotation Crystallography
    Other atoms: Cu (2);
  19. 5ony (Zn: 1) - As-Isolated Resting State Copper Nitrite Reductase From Achromobacter Xylosoxidans
    Other atoms: Cu (2);
  20. 5ool (Zn: 3) - Structure of A Native Assembly Intermediate of the Human Mitochondrial Ribosome with Unfolded Interfacial Rrna
    Other atoms: Mg (92);
  21. 5oom (Zn: 2) - Structure of A Native Assembly Intermediate of the Human Mitochondrial Ribosome with Unfolded Interfacial Rrna
    Other atoms: Mg (49);
  22. 5op6 (Zn: 1) - Factor Inhibiting Hif (Fih) in Complex with Zinc and GSK128863
  23. 5op8 (Zn: 1) - Factor Inhibiting Hif (Fih) in Complex with Zinc and Molidustat
  24. 5opc (Zn: 1) - Factor Inhibiting Hif (Fih) in Complex with Zinc and Vadadustat
    Other atoms: Cl (2);
  25. 5opj (Zn: 1) - Beta-L-Arabinofuranosidase
  26. 5opz (Zn: 2) - Crystal Structure of Serratia Marcescens L-Ala D-Glu Endopeptidase Chix
    Other atoms: Cl (1);
  27. 5oq1 (Zn: 2) - Crystal Structure of Serratia Marcescens Chix (Used As Mr Model For Superior Pdb 5OPZ)
    Other atoms: Cl (1);
  28. 5oqd (Zn: 12) - PHD2 and Winged-Helix Domain of Polycomblike
  29. 5oqj (Zn: 16) - Structure of Yeast Transcription Pre-Initiation Complex with Tfiih
    Other atoms: Mg (1); Fe (4);
  30. 5oqm (Zn: 16) - Structure of Yeast Transcription Pre-Initiation Complex with Tfiih and Core Mediator
    Other atoms: Mg (1); Fe (4);
  31. 5oqw (Zn: 2) - Xiap in Complex with Small Molecule
    Other atoms: F (2); Na (1);
  32. 5ot2 (Zn: 8) - Rna Polymerase II Elongation Complex in the Presence of 3D-Napht-A
    Other atoms: Mg (1); Br (1);
  33. 5ow3 (Zn: 3) - Crystal Structure of A C-Terminally Truncated Trimeric Ectodomain of the Arabidopsis Thaliana Gamete Fusion Protein HAP2
  34. 5ows (Zn: 2) - Crystal Structure of TNKS2 in Complex with 2-[4-(4-Methyl-2- Oxoimidazolidin-4-Yl)Phenyl]-3,4-Dihydroquinazolin-4-One
  35. 5owt (Zn: 2) - Crystal Structure of TNKS2 in Complex with (5S)-5-Methyl-5-[4-(4-Oxo- 3,4-Dihydroquinazolin-2-Yl)Phenyl]Imidazolidine-2,4-Dione
  36. 5oy3 (Zn: 1) - The Structural Basis of the Histone Demethylase KDM6B Histone 3 Lysine 27 Specificity
    Other atoms: Fe (1);
  37. 5ph0 (Zn: 1) - Pandda Analysis Group Deposition -- Crystal Structure of JMJD2D in Complex with N09484A
    Other atoms: F (3); Ni (1); Mg (1);
  38. 5ph1 (Zn: 1) - Pandda Analysis Group Deposition -- Crystal Structure of JMJD2D in Complex with N09449A
    Other atoms: F (1); Ni (1);
  39. 5ph2 (Zn: 1) - Pandda Analysis Group Deposition -- Crystal Structure of JMJD2D in Complex with N09597A
    Other atoms: Ni (1);
  40. 5ph3 (Zn: 1) - Pandda Analysis Group Deposition -- Crystal Structure of JMJD2D in Complex with N09575A
    Other atoms: Ni (1);
Page generated: Fri Dec 24 10:28:19 2021

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