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Zinc in PDB 5ons: Crystal Structure of the Minimal Denr-MCTS1 Complex

Protein crystallography data

The structure of Crystal Structure of the Minimal Denr-MCTS1 Complex, PDB code: 5ons was solved by Y.L.Ahmed, I.Sinning, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.35 / 2.14
Space group P 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 49.030, 49.030, 207.980, 90.00, 90.00, 90.00
R / Rfree (%) 20 / 25

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of the Minimal Denr-MCTS1 Complex (pdb code 5ons). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of the Minimal Denr-MCTS1 Complex, PDB code: 5ons:

Zinc binding site 1 out of 1 in 5ons

Go back to Zinc Binding Sites List in 5ons
Zinc binding site 1 out of 1 in the Crystal Structure of the Minimal Denr-MCTS1 Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the Minimal Denr-MCTS1 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn101

b:78.2
occ:1.00
SG B:CYS37 2.3 60.9 1.0
SG B:CYS34 2.4 64.2 1.0
SG B:CYS44 2.5 68.9 1.0
CB B:CYS34 3.0 54.0 1.0
CB B:CYS37 3.3 50.7 1.0
CB B:CYS44 3.5 65.8 1.0
N B:CYS37 3.6 62.6 1.0
CA B:CYS44 3.8 69.5 1.0
CG1 B:VAL36 4.0 90.8 1.0
CA B:CYS37 4.0 56.8 1.0
CA B:CYS34 4.5 61.2 1.0
N B:CYS44 4.7 66.5 1.0
C B:CYS37 4.7 62.0 1.0
N B:SER38 4.7 62.5 1.0
C B:VAL36 4.8 75.5 1.0
C B:CYS34 4.9 63.1 1.0
O B:LEU39 5.0 58.6 1.0
C B:CYS44 5.0 83.7 1.0

Reference:

Y.L.Ahmed, S.Schleich, J.Bohlen, N.Mandel, B.Simon, I.Sinning, A.A.Teleman. Denr-MCTS1 Heterodimerization and Trna Recruitment Are Required For Translation Reinitiation. Plos Biol. V. 16 05160 2018.
ISSN: ESSN 1545-7885
PubMed: 29889857
DOI: 10.1371/JOURNAL.PBIO.2005160
Page generated: Sun Oct 27 23:44:48 2024

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