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Zinc in PDB 5ony: As-Isolated Resting State Copper Nitrite Reductase From Achromobacter Xylosoxidans

Enzymatic activity of As-Isolated Resting State Copper Nitrite Reductase From Achromobacter Xylosoxidans

All present enzymatic activity of As-Isolated Resting State Copper Nitrite Reductase From Achromobacter Xylosoxidans:
1.7.2.1;

Protein crystallography data

The structure of As-Isolated Resting State Copper Nitrite Reductase From Achromobacter Xylosoxidans, PDB code: 5ony was solved by T.P.Halsted, K.Yamashita, K.Hirata, H.Ago, G.Ueno, T.Tosha, R.R.Eady, S.V.Antonyuk, M.Yamamoto, S.S.Hasnain, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.86 / 1.60
Space group H 3
Cell size a, b, c (Å), α, β, γ (°) 90.347, 90.347, 143.580, 90.00, 90.00, 120.00
R / Rfree (%) 19 / 22.3

Other elements in 5ony:

The structure of As-Isolated Resting State Copper Nitrite Reductase From Achromobacter Xylosoxidans also contains other interesting chemical elements:

Copper (Cu) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the As-Isolated Resting State Copper Nitrite Reductase From Achromobacter Xylosoxidans (pdb code 5ony). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the As-Isolated Resting State Copper Nitrite Reductase From Achromobacter Xylosoxidans, PDB code: 5ony:

Zinc binding site 1 out of 1 in 5ony

Go back to Zinc Binding Sites List in 5ony
Zinc binding site 1 out of 1 in the As-Isolated Resting State Copper Nitrite Reductase From Achromobacter Xylosoxidans


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of As-Isolated Resting State Copper Nitrite Reductase From Achromobacter Xylosoxidans within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn503

b:28.4
occ:1.00
OE2 A:GLU195 2.1 25.6 1.0
CD A:GLU195 2.8 30.6 1.0
OE1 A:GLU195 2.9 30.3 1.0
CG A:GLU195 4.1 26.6 1.0
CB A:ALA191 4.7 26.8 1.0

Reference:

T.P.Halsted, K.Yamashita, K.Hirata, H.Ago, G.Ueno, T.Tosha, R.R.Eady, S.V.Antonyuk, M.Yamamoto, S.S.Hasnain. An Unprecedented Dioxygen Species Revealed By Serial Femtosecond Rotation Crystallography in Copper Nitrite Reductase. Iucrj V. 5 22 2018.
ISSN: ESSN 2052-2525
PubMed: 29354268
DOI: 10.1107/S2052252517016128
Page generated: Wed Dec 16 06:39:09 2020

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