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Zinc in PDB, part 497 (files: 19841-19880), PDB 8eup-8f86

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 19841-19880 (PDB 8eup-8f86).
  1. 8eup (Zn: 1) - YTM1 Associated 60S Nascent Ribosome State 1A
  2. 8euy (Zn: 1) - YTM1 Associated Nascent 60S Ribosome (-FKBP39) State 1A
  3. 8ev3 (Zn: 1) - YTM1 Associated 60S Nascent Ribosome (-FKBP39) State 1B
  4. 8ewi (Zn: 12) - Structure of the Human UBR5 Hect-Type E3 Ubiquitin Ligase in A Tetrameric Form
  5. 8ewo (Zn: 6) - Crystal Structure of Putative Glyoxylase II From Pseudomonas Aeruginosa
    Other atoms: Cl (3);
  6. 8ewz (Zn: 1) - Plasmodium Falciparum M1 in Complex with Inhibitor 9C
    Other atoms: Mg (4); F (3);
  7. 8ex3 (Zn: 1) - Plasmodium Falciparum M1 in Complex with Inhibitor 9AA
    Other atoms: F (3); Mg (5);
  8. 8exc (Zn: 1) - Human Carbonic Anhydrase II Bound Tert-Butyl (3-(4-(3-((2-(2,6- Dioxopiperidin-3-Yl)-1,3-Dioxoisoindolin-4-Yl)Amino)Propoxy)Butoxy) Propyl)Carbamate
    Other atoms: Hg (1);
  9. 8exg (Zn: 1) - Human Carbonic Anhydrase II Bound N-(2-(2-((2-(2,6-Dioxopiperidin-3- Yl)-1,3-Dioxoisoindolin-4-Yl)Amino)Ethoxy)Ethyl)-4-Sulfamoylbenzamide
    Other atoms: Hg (1);
  10. 8exp (Zn: 2) - Cryo-Em Structure of S. Aureus BLAR1 with C2 Symmetry
  11. 8exq (Zn: 2) - Cryo-Em Structure of S. Aureus BLAR1 with C1 Symmetry
  12. 8exr (Zn: 2) - Cryo-Em Structure of S. Aureus BLAR1 Tm and Zinc Metalloprotease Domain
  13. 8exs (Zn: 2) - Cryo-Em Structure of S. Aureus BLAR1 F284A Mutant
  14. 8ext (Zn: 2) - Cryo-Em Structure of S. Aureus BLAR1 F284A Mutant in Complex with Ampicillin
  15. 8exy (Zn: 2) - M. Tuberculosis Rnap Paused Complex with B. Subtilis Nusg and Gmpcpp
    Other atoms: Mg (1);
  16. 8eyd (Zn: 1) - Plasmodium Falciparum M1 in Complex with Inhibitor 15AH
    Other atoms: F (2); Br (2);
  17. 8eye (Zn: 1) - Plasmodium Falciparum M1 in Complex with Inhibitor 9AJ
    Other atoms: Mg (4); F (5);
  18. 8eyf (Zn: 1) - Plasmodium Falciparum M1 in Complex with Inhibitor 15AA
    Other atoms: Br (1);
  19. 8eyl (Zn: 1) - Human Carbonic Anhydrase II with Tert-Butyl (2-(2-((2-(2,6- Dioxopiperidin-3-Yl)-1,3-Dioxoisoindolin-4-Yl)Amino)Ethoxy)Ethyl) Carbamate
    Other atoms: Hg (1);
  20. 8ez2 (Zn: 1) - Plasmodium Falciparum M1 in Complex with Inhibitor 15AG
    Other atoms: F (1); Mg (2); Br (1);
  21. 8ez4 (Zn: 24) - Plasmodium Falciparum M17 in Complex with Inhibitor 9AA
    Other atoms: F (36); Na (9);
  22. 8f0v (Zn: 3) - Lipocalin-Like Milk Protein-2 - E38A Mutant
  23. 8f1b (Zn: 21) - Structure of Zinc-Bound Zrga Deletion 124-184 From Vibrio Cholerae
  24. 8f1c (Zn: 4) - Voltage-Gated Potassium Channel KV3.1 with Novel Positive Modulator (9M)-9-{5-Chloro-6-[(3,3-Dimethyl-2,3-Dihydro-1-Benzofuran-4-Yl)Oxy]- 4-Methylpyridin-3-Yl}-2-Methyl-7,9-Dihydro-8H-Purin-8-One (Compound 4)
    Other atoms: K (4); Cl (4);
  25. 8f1d (Zn: 4) - Voltage-Gated Potassium Channel KV3.1 Apo
    Other atoms: K (4);
  26. 8f1i (Zn: 2) - Sign Rna Polymerase Early-Melted Intermediate Bound to Mismatch Fragment DHSU36MM1 (-12T)
    Other atoms: Mg (1);
  27. 8f1j (Zn: 2) - Sign Rna Polymerase Early-Melted Intermediate Bound to Mismatch Dna Fragment DHSU36MM2 (-12A)
    Other atoms: Mg (1);
  28. 8f1k (Zn: 2) - Sign Rna Polymerase Early-Melted Intermediate Bound to Full Duplex Dna Fragment DHSU36 (-12T)
    Other atoms: Mg (1);
  29. 8f4s (Zn: 2) - Crystal Structure of the Sars-Cov-2 2'-O-Methyltransferase with Compound 5A Bound to the Cryptic Pocket of NSP16
    Other atoms: Cl (2); Na (1); F (3);
  30. 8f4y (Zn: 2) - Crystal Structure of Sars-Cov-2 2'-O-Methyltransferase in Complex with Compound 5A Covalently Bound to NSP16 and NSP10
    Other atoms: Cl (8); F (12); Na (2);
  31. 8f5o (Zn: 4) - Structure of Leishmania Tarentolae Ift-A (State 1)
  32. 8f5p (Zn: 4) - Structure of Leishmania Tarentolae Ift-A (State 2)
  33. 8f5v (Zn: 4) - Crystal Structure of Mycobacterium Tuberculosis Mycothiol S- Transferase Enzyme in Complex with Mycothiol and ZN2+
  34. 8f6e (Zn: 8) - Cryo-Em Structure of A Zinc-Loaded Wild-Type Yiip-Fab Complex
  35. 8f6f (Zn: 6) - Cryo-Em Structure of A Zinc-Loaded D51A Mutant of the Yiip-Fab Complex
  36. 8f6h (Zn: 6) - Cryo-Em Structure of A Zinc-Loaded Asymmetrical Tmd D70A Mutant of the Yiip-Fab Complex
  37. 8f6i (Zn: 6) - Cryo-Em Structure of A Zinc-Loaded Symmetrical D70A Mutant of the Yiip-Fab Complex
  38. 8f6j (Zn: 8) - Cryo-Em Structure of A Zinc-Loaded D287A Mutant of the Yiip-Fab Complex
  39. 8f6k (Zn: 4) - Cryo-Em Structure of A Zinc-Loaded H263A/D287A Mutant of the Yiip-Fab Complex
  40. 8f86 (Zn: 1) - SIRT6 Bound to An H3K9AC Nucleosome
Page generated: Thu Dec 28 12:59:57 2023

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