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Zinc in PDB 8b6m: Tankyrase 2 in Complex with An Inhibitor

Enzymatic activity of Tankyrase 2 in Complex with An Inhibitor

All present enzymatic activity of Tankyrase 2 in Complex with An Inhibitor:
2.4.2.30;

Protein crystallography data

The structure of Tankyrase 2 in Complex with An Inhibitor, PDB code: 8b6m was solved by C.Bosetti, S.T.Sowa, L.Lehtio, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.69 / 1.60
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 90.57, 97.37, 119.24, 90, 90, 90
R / Rfree (%) 18.5 / 21.9

Zinc Binding Sites:

The binding sites of Zinc atom in the Tankyrase 2 in Complex with An Inhibitor (pdb code 8b6m). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Tankyrase 2 in Complex with An Inhibitor, PDB code: 8b6m:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 8b6m

Go back to Zinc Binding Sites List in 8b6m
Zinc binding site 1 out of 2 in the Tankyrase 2 in Complex with An Inhibitor


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Tankyrase 2 in Complex with An Inhibitor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1204

b:27.3
occ:1.00
ND1 A:HIS1084 2.1 24.6 1.0
SG A:CYS1081 2.3 27.3 1.0
SG A:CYS1089 2.3 26.7 1.0
SG A:CYS1092 2.3 27.9 1.0
CE1 A:HIS1084 3.0 33.6 1.0
CG A:HIS1084 3.2 31.6 1.0
CB A:CYS1081 3.2 25.8 1.0
CB A:CYS1089 3.3 24.6 1.0
CB A:CYS1092 3.3 24.9 1.0
CB A:HIS1084 3.6 29.0 1.0
N A:CYS1092 3.9 24.4 1.0
N A:HIS1084 3.9 29.2 1.0
NE2 A:HIS1084 4.1 33.0 1.0
CA A:CYS1092 4.2 23.2 1.0
O A:HOH1373 4.2 35.3 1.0
CD2 A:HIS1084 4.2 31.2 1.0
CA A:HIS1084 4.4 28.1 1.0
CB A:VAL1083 4.4 34.1 1.0
CA A:CYS1081 4.6 25.9 1.0
CA A:CYS1089 4.7 26.4 1.0
CB A:ILE1091 4.8 30.4 1.0
O A:HOH1312 4.8 29.0 1.0
C A:VAL1083 4.8 35.1 1.0
N A:VAL1083 4.9 32.3 1.0
CG1 A:VAL1083 4.9 37.4 1.0
CA A:VAL1083 5.0 34.4 1.0

Zinc binding site 2 out of 2 in 8b6m

Go back to Zinc Binding Sites List in 8b6m
Zinc binding site 2 out of 2 in the Tankyrase 2 in Complex with An Inhibitor


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Tankyrase 2 in Complex with An Inhibitor within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Zn1201

b:24.9
occ:1.00
ND1 C:HIS1084 2.1 26.8 1.0
SG C:CYS1081 2.3 23.8 1.0
SG C:CYS1092 2.3 26.4 1.0
SG C:CYS1089 2.4 25.0 1.0
CE1 C:HIS1084 3.0 27.9 1.0
CG C:HIS1084 3.1 28.0 1.0
CB C:CYS1081 3.2 22.6 1.0
CB C:CYS1092 3.3 26.3 1.0
CB C:CYS1089 3.3 21.8 1.0
CB C:HIS1084 3.5 26.2 1.0
N C:HIS1084 3.9 30.7 1.0
N C:CYS1092 4.0 22.6 1.0
O C:HOH1345 4.1 38.4 1.0
NE2 C:HIS1084 4.1 30.6 1.0
CD2 C:HIS1084 4.2 28.6 1.0
CA C:CYS1092 4.2 23.2 1.0
O C:HOH1365 4.2 33.4 1.0
CB C:VAL1083 4.3 29.5 1.0
CA C:HIS1084 4.3 25.5 1.0
CA C:CYS1081 4.6 24.7 1.0
CA C:CYS1089 4.7 23.5 1.0
C C:VAL1083 4.7 31.4 1.0
CB C:ILE1091 4.8 24.1 1.0
N C:VAL1083 4.8 27.4 1.0
CA C:VAL1083 4.8 30.6 1.0
O C:HOH1312 4.9 26.6 1.0
CG1 C:VAL1083 4.9 31.7 1.0

Reference:

C.Bosetti, S.T.Sowa, L.Lehtio. Tankyrase 2 in Complex with An Inhibitor To Be Published.
Page generated: Thu Dec 28 12:50:21 2023

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