Zinc in PDB, part 418 (files: 16681-16720),
PDB 6y5e-6ygy
Experimental structures of coordination spheres of Zinc (Zn) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Zinc atoms. PDB files: 16681-16720 (PDB 6y5e-6ygy).
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6y5e (Zn: 1) - Structure of Human Cgas (K394E) Bound to the Nucleosome (Focused Refinement of Cgas-Ncp Subcomplex)
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6y5m (Zn: 2) - Crystal Structure of Mouse Autotaxin in Complex with Compound 1A
Other atoms:
F (1);
Cl (3);
Na (4);
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6y5n (Zn: 4) - Ring-Dtc Domain of DELTEX1
Other atoms:
Cl (2);
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6y5p (Zn: 4) - Ring-Dtc Domain of DELTEX1 Bound to Nad
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6y6j (Zn: 3) - Vim-2 in Complex with Biapenem Imine and Enamine Hydrolysis Products
Other atoms:
Cl (3);
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6y6y (Zn: 1) - Pseudomonas Stutzeri Nitrous Oxide Reductase Mutant, H129A
Other atoms:
Ca (1);
Na (2);
Cu (4);
Cl (2);
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6y74 (Zn: 2) - X-Ray Crystal Structure of Human Carbonic Anhydrase IX Catalytic Domain.
Other atoms:
Cl (3);
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6y75 (Zn: 4) - BIL2 Domain From T.Thermophila BUBL1 Locus (C1A-N143A)
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6y77 (Zn: 2) - Pseudomonas Stutzeri Nitrous Oxide Reductase Mutant, H326A
Other atoms:
Cu (4);
Na (2);
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6y79 (Zn: 1) - Cryo-Em Structure of A Respiratory Complex I F89A Mutant
Other atoms:
Fe (28);
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6y7e (Zn: 3) - Pseudomonas Stutzeri Nitrous Oxide Reductase Mutant, H494A
Other atoms:
Ca (1);
Na (2);
Cl (2);
Cu (4);
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6y8l (Zn: 7) - Mycobacterium Thermoresistibile GYRB21 in Complex with Novobiocin
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6y8n (Zn: 6) - Mycobacterium Thermoresistibile GYRB21 in Complex with REDX03863
Other atoms:
F (2);
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6y8p (Zn: 1) - Crystal Structure of Snap-Tag Labeled with A Benzyl- Tetramethylrhodamine Fluorophore
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6ya1 (Zn: 5) - Zinc Metalloprotease Proa
Other atoms:
Ca (4);
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6ya6 (Zn: 2) - Minimal Construct of CDC7-DBF4 Bound to XL413
Other atoms:
Cl (2);
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6ya7 (Zn: 4) - CDC7-DBF4 Bound to An MCM2-S40 Derived Bivalent Substrate
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6ya8 (Zn: 2) - CDC7-DBF4 Bound to Adp-BEF3
Other atoms:
F (3);
Mg (2);
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6ybs (Zn: 1) - Structure of A Human 48S Translational Initiation Complex - Head
Other atoms:
Mg (29);
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6ybw (Zn: 1) - Structure of A Human 48S Translational Initiation Complex - 40S Body
Other atoms:
Mg (60);
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6ydx (Zn: 2) - Insulin-Regulated Aminopeptidase Complexed with A Macrocyclic Peptidic Inhibitor
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6ye1 (Zn: 4) - Human Ecto-5'-Nucleotidase (CD73) in Complex with the Ampcp Derivative A894 (Compound 2N in Publication) in the Closed Form (Crystal Form IV)
Other atoms:
Cl (2);
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6ye2 (Zn: 4) - Human Ecto-5'-Nucleotidase (CD73) in Complex with the Ampcp Derivative A1202 (Compound 4A in Publication) in the Closed Form (Crystal Form IV)
Other atoms:
Cl (2);
Ca (2);
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6yen (Zn: 2) - Crystal Structure of Ampc From E. Coli with Taniborbactam (Vnrx-5133)
Other atoms:
Cl (3);
Na (1);
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6yes (Zn: 2) - Crystal Structure of Type I-D Crispr-Cas Nuclease CAS10D
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6yfv (Zn: 2) - Crystal Structure of MTR4-RED1 Minimal Complex From Chaetomium Thermophilum
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6yfw (Zn: 1) - Tgt H333F Mutant Crystallised at pH 8.5
Other atoms:
Cl (1);
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6yfx (Zn: 1) - Tgt Y330F Mutant Crystallised at pH 5.5
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6ygk (Zn: 1) - Tgt Y330F Mutant Crystallised at pH 8.5
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6ygl (Zn: 1) - Tgt W326F Mutant Labelled Mit 5F-Trp Crystallised at pH 5.5
Other atoms:
F (3);
Cl (1);
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6ygm (Zn: 1) - Tgt W95F Mutant Labelled Mit 5F-Trp Crystallised at pH 5.5
Other atoms:
F (3);
-
6ygo (Zn: 1) - Tgt W95F Mutant Labelled Mit 5F-Trp Crystallised at pH 8.5
Other atoms:
F (3);
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6ygp (Zn: 1) - Tgt Wt Labelled Mit 5F-Trp Crystallised at pH 5.5
Other atoms:
F (4);
Cl (1);
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6ygr (Zn: 1) - Trna-Guanine Transglycosylase (Tgt) in Co-Crystallized Complex with 6- Amino-4-(2-Phenylethyl)-1,7-Dihydro-8H-Imidazo[4,5-G]Quinazolin-8-One
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6ygs (Zn: 1) - Trna-Guanine Transglycosylase (Tgt) in Co-Crystallized Complex with 6- Amino-2-(Methylamino)-4-(4-(Trifluoromethyl)Phenethyl)-3,7-Dihydro- 8H-Imidazo[4,5-G]Quinazolin-8-One
Other atoms:
F (6);
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6ygu (Zn: 2) - Crystal Structure of the Minimal MTR4-RED1 Complex (Single Chain) From Chaetomium Thermophilum
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6ygv (Zn: 1) - Trna-Guanine Transglycosylase (Tgt) in Co-Crystallized Complex with (E)-N-Ethyl-4-Oxo-4-Phenylbut-2-Enamide
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6ygw (Zn: 1) - Tgt W178F Mutant Labelled Mit 5F-Trp Crystallised at pH 5.5
Other atoms:
F (3);
Cl (1);
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6ygx (Zn: 1) - Trna-Guanine Transglycosylase (Tgt) Labeled with 5-Fluorotryptophan in Co-Crystallized Complex with 6-Amino-2-(Methylamino)-4-(2-((2R,3R,4S, 5R,6S)-3,4,5,6-Tetramethoxytetrahydro-2H-Pyran-2-Yl)Ethyl)-1H- Imidazo[4,5-G]Quinazolin-8(7H)-One
Other atoms:
F (4);
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6ygy (Zn: 1) - Trna-Guanine Transglycosylase (Tgt) Labeled with 5-Fluorotryptophan in Co-Crystallized Complex with 6-Amino-4-[2-(4-Methylphenyl)Ethyl]-1,7- Dihydro-8H-Imidazo[4,5-G]Quinazolin-8-One
Other atoms:
F (4);
Page generated: Thu Dec 28 12:37:22 2023
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