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Zinc in PDB, part 407 (files: 16241-16280), PDB 6x5a-6xpf

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 16241-16280 (PDB 6x5a-6xpf).
  1. 6x5a (Zn: 1) - The Mouse Cgas Catalytic Domain Binding to Human Nucleosome That Purified From HEK293T Cells
  2. 6x5x (Zn: 1) - Crystal Structure O Bmoomp-I, A P-I Metalloproteinase From Bothrops Moojeni
    Other atoms: Ca (1);
  3. 6x67 (Zn: 4) - Cryo-Em Structure of Piggybac Transposase Strand Transfer Complex (Stc)
    Other atoms: Ca (4);
  4. 6x68 (Zn: 4) - Cryo-Em Structure of Piggybac Transposase Synaptic Complex with Hairpin Dna (Snhp)
    Other atoms: Ca (4);
  5. 6x91 (Zn: 8) - Crystal Structure of Mbp-Fused Human APOBEC1
    Other atoms: As (8);
  6. 6xa9 (Zn: 3) - Sars Cov-2 Plpro in Complex with ISG15 C-Terminal Domain Propargylamide
  7. 6xaa (Zn: 1) - Sars Cov-2 Plpro in Complex with Ubiquitin Propargylamide
  8. 6xas (Zn: 2) - Cryoem Structure of E. Coli Rho-Dependent Transcription Pre- Termination Complex
    Other atoms: Mg (1);
  9. 6xav (Zn: 2) - Cryoem Structure of E. Coli Rho-Dependent Transcription Pre- Termination Complex Bound with Nusg
    Other atoms: Mg (1);
  10. 6xb8 (Zn: 4) - Adeno-Associated Virus Origin Binding Domain in Complex with Ssdna
  11. 6xcb (Zn: 1) - Structure of the C. Botulinum Neurotoxin Serotype A Light Chain Protease in Complex with Covalent Inhibitor 20
  12. 6xcc (Zn: 1) - Structure of the C. Botulinum Neurotoxin Serotype A Light Chain Protease in Complex with Covalent Inhibitor 21
  13. 6xcf (Zn: 1) - Structure of the C. Botulinum Neurotoxin Serotype A Light Chain Protease in Complex with Noncovalent Inhibitor 59
    Other atoms: Cl (2);
  14. 6xd0 (Zn: 2) - Dengue Serotype 3 Rna-Dependent Rna Polymerase Bound to Nitd-434
    Other atoms: Cl (2);
  15. 6xd1 (Zn: 2) - Dengue Serotype 3 Rna-Dependent Rna Polymerase Bound to Nitd-640
  16. 6xdm (Zn: 3) - Structure of Human HDAC2 in Complex with An Aryl Ketone Inhibitor
    Other atoms: F (3); Ca (6);
  17. 6xeb (Zn: 3) - Structure of Human HDAC2 in Complex with Ketone Inhibitor (Compound E)
    Other atoms: Ca (6);
  18. 6xec (Zn: 3) - Structure of Human HDAC2 in Complex with Ketone Inhibitor (Compound O)
    Other atoms: F (3); Ca (6);
  19. 6xez (Zn: 8) - Structure of Sars-Cov-2 Replication-Transcription Complex Bound to NSP13 Helicase - NSP13(2)-Rtc
    Other atoms: F (6); Mg (3); Al (2);
  20. 6xf9 (Zn: 15) - Crystal Structure of Kshv ORF68
  21. 6xfa (Zn: 20) - Cryo-Em Structure of Ebv BFLF1
  22. 6xg3 (Zn: 1) - The Crystal Structure of Papain-Like Protease of Sars Cov-2 , C111S Mutant, at Room Temperature
    Other atoms: Cl (1);
  23. 6xgu (Zn: 3) - Crystal Structure of Kras-Q61R (Gmppnp-Bound) in Complex with Ras- Binding Domain (Rbd) and Cysteine-Rich Domain (Crd) of RAF1/Craf
    Other atoms: As (1); Mg (1);
  24. 6xgv (Zn: 3) - Crystal Structure of Kras-G13D (Gmppnp-Bound) in Complex with Ras- Binding Domain (Rbd) and Cysteine-Rich Domain (Crd) of RAF1/Craf
    Other atoms: Cl (1); As (1); Mg (1);
  25. 6xha (Zn: 2) - Crystal Structure of Kras-G12V (Gmppnp-Bound) in Complex with Ras- Binding Domain (Rbd) and Cysteine-Rich Domain (Crd) of RAF1/Craf
    Other atoms: As (1); Mg (1); Cl (2);
  26. 6xhb (Zn: 2) - Crystal Structure of Wild-Type Kras (Gmppnp-Bound) in Complex with Ras-Binding Domain (Rbd) and Cysteine-Rich Domain (Crd) of RAF1/Craf (Crystal Form II)
    Other atoms: Cl (3); As (1); Mg (1);
  27. 6xi7 (Zn: 3) - Crystal Structure of Wild-Type Kras (Gmppnp-Bound) in Complex with Ras-Binding Domain (Rbd) and Cysteine-Rich Domain (Crd) of RAF1/Craf (Crystal Form I)
    Other atoms: Cl (5); Mg (1);
  28. 6xjd (Zn: 2) - Two Mouse Cgas Catalytic Domain Binding to Human Assembled Nucleosome
  29. 6xk9 (Zn: 2) - Cereblon in Complex with DDB1, Cc-90009, and GSPT1
    Other atoms: F (4); Cl (2);
  30. 6xkm (Zn: 2) - Room Temperature Structure of Sars-Cov-2 NSP10/NSP16 Methyltransferase in A Complex with Sam Determined By Fixed-Target Serial Crystallography
    Other atoms: Cl (1);
  31. 6xly (Zn: 1) - Cryoem Structure of Mycobacterium Tuberculosis Zinc Metalloprotease ZMP1 in Open State
  32. 6xmf (Zn: 1) - Cryo-Em Structure of CAS12G Binary Complex
  33. 6xmg (Zn: 1) - Cryo-Em Structure of CAS12G Ternary Complex
  34. 6xmy (Zn: 1) - Crystal Structure of 4-Hydroxythreonine-4-Phosphate Dehydrogenase From Legionella Pneumophila in Complex with Nad
  35. 6xnx (Zn: 2) - Structure of RAG1 (R848M/E649V)-RAG2-Dna Strand Transfer Complex (Dynamic-Form)
    Other atoms: Mg (4);
  36. 6xny (Zn: 2) - Structure of RAG1 (R848M/E649V)-RAG2-Dna Strand Transfer Complex (Paired-Form)
    Other atoms: Mg (4);
  37. 6xnz (Zn: 2) - Structure of RAG1 (R848M/E649V)-RAG2-Dna Target Capture Complex
  38. 6xpd (Zn: 4) - Cryo-Em Structure of Human ZNT8 Double Mutant - D110N and D224N, Determined in Outward-Facing Conformation
  39. 6xpe (Zn: 8) - Cryo-Em Structure of Human ZNT8 Wt, in the Presence of Zinc, Determined in Outward-Facing Conformation
  40. 6xpf (Zn: 4) - Cryo-Em Structure of Human ZNT8 Wt, in the Absence of Zinc, Determined in Heterogeneous Conformations- One Subunit in An Inward-Facing and the Other in An Outward-Facing Conformation
Page generated: Wed Mar 3 16:12:42 2021

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