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Zinc in PDB, part 248 (files: 9881-9920), PDB 4uxp-4w2r

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 9881-9920 (PDB 4uxp-4w2r).
  1. 4uxp (Zn: 1) - Conserved Mechanisms of Microtubule-Stimulated Adp Release, Atp Binding, and Force Generation in Transport Kinesins
    Other atoms: Mg (2);
  2. 4uxr (Zn: 1) - Conserved Mechanisms of Microtubule-Stimulated Adp Release, Atp Binding, and Force Generation in Transport Kinesins
    Other atoms: F (4); Mg (2); Al (1);
  3. 4uxs (Zn: 1) - Conserved Mechanisms of Microtubule-Stimulated Adp Release, Atp Binding, and Force Generation in Transport Kinesins
    Other atoms: Mg (1);
  4. 4uxt (Zn: 1) - Conserved Mechanisms of Microtubule-Stimulated Adp Release, Atp Binding, and Force Generation in Transport Kinesins
    Other atoms: Mg (1);
  5. 4uxx (Zn: 2) - Structure of DELTA4-Dgka with Amppcp in 9.9 Mag
    Other atoms: Cl (1); Na (3);
  6. 4uxy (Zn: 1) - Conserved Mechanisms of Microtubule-Stimulated Adp Release, Atp Binding, and Force Generation in Transport Kinesins
    Other atoms: Mg (1);
  7. 4uxz (Zn: 1) - Structure of DELTA7-Dgka-Syn in 7.9 Mag to 2.18 Angstrom Resolution
  8. 4uy0 (Zn: 1) - Conserved Mechanisms of Microtubule-Stimulated Adp Release, Atp Binding, and Force Generation in Transport Kinesins
    Other atoms: F (4); Mg (2); Al (1);
  9. 4uy8 (Zn: 1) - Molecular Basis For the Ribosome Functioning As A L-Tryptophan Sensor - Cryo-Em Structure of A Tnac Stalled E.Coli Ribosome
    Other atoms: Mg (143);
  10. 4uyo (Zn: 1) - Structure of DELTA7-Dgka in 7.9 Mag By Serial Femtosecond Crystatallography to 2.18 Angstrom Resolution
  11. 4v0q (Zn: 2) - Dengue Virus Full Length NS5 Complexed with Sah
  12. 4v0r (Zn: 2) - Dengue Virus Full Length NS5 Complexed with Gtp and Sah
    Other atoms: Mg (2);
  13. 4v19 (Zn: 2) - Structure of the Large Subunit of the Mammalian Mitochondrial Ribosome, Part 1 of 2
    Other atoms: Mg (169);
  14. 4v1a (Zn: 1) - Structure of the Large Subunit of the Mammalian Mitochondrial Ribosome, Part 2 of 2
  15. 4v1m (Zn: 8) - Architecture of the Rna Polymerase II-Mediator Core Transcription Initiation Complex
    Other atoms: Br (1); Mg (1);
  16. 4v1n (Zn: 9) - Architecture of the Rna Polymerase II-Mediator Core Transcription Initiation Complex
    Other atoms: Mg (1);
  17. 4v1o (Zn: 9) - Architecture of the Rna Polymerase II-Mediator Core Transcription Initiation Complex
    Other atoms: Mg (1);
  18. 4v1t (Zn: 2) - Heterocyclase in Complex with Substrate and Cofactor
    Other atoms: Mg (6);
  19. 4v1u (Zn: 2) - Heterocyclase in Complex with Substrate and Cofactor
    Other atoms: Ca (4);
  20. 4v1v (Zn: 2) - Heterocyclase in Complex with Substrate and Cofactor
    Other atoms: Mg (4);
  21. 4v1z (Zn: 2) - The 3-D Structure of the Cellobiohydrolase, CEL7A, From Aspergillus Fumigatus
  22. 4v20 (Zn: 2) - The 3-D Structure of the Cellobiohydrolase, CEL7A, From Aspergillus Fumigatus, Disaccharide Complex
    Other atoms: F (1);
  23. 4v2v (Zn: 2) - JMJD2A Complexed with Ni(II), Nog and Histone H3K27ME3 Peptide (25-29) Ark(ME3)Sa
    Other atoms: Ni (2); Cl (1);
  24. 4v2w (Zn: 2) - JMJD2A Complexed with Ni(II), Nog and Histone H3K27ME3 Peptide (16-35)
    Other atoms: Ni (2); Cl (2);
  25. 4v2y (Zn: 3) - Cereblon Isoform 4 From Magnetospirillum Gryphiswaldense in Complex with Thalidomide
  26. 4v2z (Zn: 3) - Cereblon Isoform 4 From Magnetospirillum Gryphiswaldense in Complex with Pomalidomide
  27. 4v30 (Zn: 3) - Cereblon Isoform 4 From Magnetospirillum Gryphiswaldense in Complex with Lenalidomide
  28. 4v31 (Zn: 3) - Cereblon Isoform 4 From Magnetospirillum Gryphiswaldense in Complex with Deoxyuridine
  29. 4v32 (Zn: 3) - Cereblon Isoform 4 From Magnetospirillum Gryphiswaldense in Complex with Thalidomide, Y101F Mutant
  30. 4v33 (Zn: 2) - Crystal Structure of the Putative Polysaccharide Deacetylase BA0330 From Bacillus Anthracis
  31. 4v3k (Zn: 4) - RNF38-UBCH5B-Ub Complex
    Other atoms: Cl (6);
  32. 4v3l (Zn: 2) - RNF38-Ub-UBCH5B-Ub Complex
  33. 4v3u (Zn: 2) - Structure of Human Nnos R354A G357D Mutant Heme Domain in Complex with N-2-(2-(1H-Imidazol-1-Yl)Pyrimidin-4-Yl)Ethyl- 3-(Pyridin-3-Yl)Propan-1-Amine
    Other atoms: Fe (4);
  34. 4v3v (Zn: 1) - Structure of Rat Neuronal Nitric Oxide Synthase Heme Domain in Complex with N-(2-(1H-Imidazol-1-Yl)-4-Pyrimidylmethyl)- 3-(3-Fluorophenyl)Propan-1-Amine
    Other atoms: F (2); Fe (2);
  35. 4v3w (Zn: 1) - Structure of Rat Neuronal Nitric Oxide Synthase Heme Domain in Complex with 2-(2-(1H-Imidazol-1-Yl)Pyrimidin-4-Yl)-N-( 3-Fluorophenethyl)Ethan-1-Amine
    Other atoms: F (2); Fe (2);
  36. 4v3x (Zn: 1) - Structure of Rat Neuronal Nitric Oxide Synthase Heme Domain in Complex with N-2-(2-(1H-Imidazol-1-Yl)Pyrimidin-4-Yl) Ethyl-3-(3-Fluorophenyl)Propan-1-Amine
    Other atoms: F (2); Fe (2);
  37. 4v3y (Zn: 1) - Structure of Rat Neuronal Nitric Oxide Synthase Heme Domain in Complex with N-2-(2-(1H-Imidazol-1-Yl)Pyrimidin-4-Yl) Ethyl-3-(3-Chlorophenyl)Propan-1-Amine
    Other atoms: Fe (2); Cl (2);
  38. 4v3z (Zn: 1) - Structure of Rat Neuronal Nitric Oxide Synthase Heme Domain in Complex with 2-(2-(1H-Imidazol-1-Yl)Pyrimidin-4-Yl)-N-( 2-(3-Fluorophenyl)Cyclopropylmethyl)Ethan-1-Amine
    Other atoms: F (2); Fe (2);
  39. 4w1o (Zn: 8) - PDE4D Complexed with Inhibitor
    Other atoms: Cl (8);
  40. 4w2r (Zn: 14) - Structure of Hs/ACPRC2 in Complex with 5,8-Dichloro-2-[(4-Methoxy-6- Methyl-2-Oxo-1,2-Dihydropyridin-3-Yl)Methyl]-7-[(R)-Methoxy(Oxetan-3- Yl)Methyl]-3,4-Dihydroisoquinolin-1(2H)-One
    Other atoms: Cl (4);
Page generated: Wed Mar 3 16:01:34 2021

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