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Zinc in PDB 4v1z: The 3-D Structure of the Cellobiohydrolase, CEL7A, From Aspergillus Fumigatus

Enzymatic activity of The 3-D Structure of the Cellobiohydrolase, CEL7A, From Aspergillus Fumigatus

All present enzymatic activity of The 3-D Structure of the Cellobiohydrolase, CEL7A, From Aspergillus Fumigatus:
3.2.1.91;

Protein crystallography data

The structure of The 3-D Structure of the Cellobiohydrolase, CEL7A, From Aspergillus Fumigatus, PDB code: 4v1z was solved by O.V.Moroz, M.Maranta, T.Shaghasi, P.V.Harris, K.S.Wilson, G.J.Davies, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 67.85 / 1.78
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 79.230, 131.390, 45.920, 90.00, 90.00, 90.00
R / Rfree (%) 14.406 / 18.895

Zinc Binding Sites:

The binding sites of Zinc atom in the The 3-D Structure of the Cellobiohydrolase, CEL7A, From Aspergillus Fumigatus (pdb code 4v1z). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the The 3-D Structure of the Cellobiohydrolase, CEL7A, From Aspergillus Fumigatus, PDB code: 4v1z:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 4v1z

Go back to Zinc Binding Sites List in 4v1z
Zinc binding site 1 out of 2 in the The 3-D Structure of the Cellobiohydrolase, CEL7A, From Aspergillus Fumigatus


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The 3-D Structure of the Cellobiohydrolase, CEL7A, From Aspergillus Fumigatus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1441

b:34.0
occ:1.00
O A:HOH2429 1.5 23.9 1.0
OE2 A:GLU415 2.0 38.8 1.0
NE2 A:HIS377 2.1 26.3 1.0
OD1 A:ASP375 2.2 18.5 1.0
OD2 A:ASP375 2.6 24.6 1.0
CG A:ASP375 2.7 19.2 1.0
CE1 A:HIS377 3.0 24.1 1.0
CD2 A:HIS377 3.2 26.1 1.0
CD A:GLU415 3.3 38.9 1.0
O A:HOH2279 3.7 50.7 1.0
CB A:PRO411 3.9 27.1 1.0
CG2 A:ILE104 4.0 24.2 1.0
CG A:GLU415 4.0 31.5 1.0
O A:HOH2278 4.1 35.5 1.0
ND1 A:HIS377 4.1 27.5 1.0
OE1 A:GLU415 4.2 35.2 1.0
CB A:ASP375 4.2 17.6 1.0
CG A:HIS377 4.3 25.4 1.0
O A:HOH2458 4.6 37.4 1.0
CG A:PRO411 4.7 25.1 1.0
CZ A:PHE95 4.8 20.1 1.0
CA A:PRO411 4.8 25.8 1.0
OD2 A:ASP198 4.8 26.6 1.0
CD1 A:ILE104 4.8 32.1 1.0
O A:ASP375 4.9 18.1 1.0
CB A:ILE104 4.9 20.1 1.0
C A:ASP375 4.9 19.9 1.0
CA A:ASP375 5.0 16.6 1.0

Zinc binding site 2 out of 2 in 4v1z

Go back to Zinc Binding Sites List in 4v1z
Zinc binding site 2 out of 2 in the The 3-D Structure of the Cellobiohydrolase, CEL7A, From Aspergillus Fumigatus


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of The 3-D Structure of the Cellobiohydrolase, CEL7A, From Aspergillus Fumigatus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1442

b:31.6
occ:1.00
O A:HOH2470 2.2 26.8 1.0
OD1 A:ASP46 2.3 29.7 1.0
O A:HOH2089 2.4 30.1 1.0
O A:HOH2088 2.6 37.0 1.0
CG A:ASP46 3.2 31.1 1.0
OD2 A:ASP46 3.4 39.6 1.0
N A:TYR47 4.0 25.6 1.0
OG1 A:THR48 4.1 31.8 1.0
CB A:TYR47 4.4 26.7 1.0
CD1 A:TYR47 4.4 35.5 1.0
CB A:ASP46 4.6 26.8 1.0
N A:THR48 4.6 20.2 1.0
CA A:TYR47 4.7 24.0 1.0
C A:TYR47 4.9 22.9 1.0
CG A:TYR47 4.9 27.6 1.0
CA A:ASP46 4.9 24.2 1.0
C A:ASP46 5.0 24.5 1.0

Reference:

O.V.Moroz, M.Maranta, T.Shaghasi, P.V.Harris, K.S.Wilson, G.J.Davies. The Three-Dimensional Structure of the Cellobiohydrolase CEL7A From Aspergillus Fumigatus at 1.5 A Resolution Acta Crystallogr.,Sect.F V. 71 114 2015.
ISSN: ISSN 1744-3091
PubMed: 25615982
DOI: 10.1107/S2053230X14027307
Page generated: Sun Oct 27 09:29:38 2024

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