Zinc in PDB 4uy8: Molecular Basis For the Ribosome Functioning As A L-Tryptophan Sensor - Cryo-Em Structure of A Tnac Stalled E.Coli Ribosome

The structure of Molecular Basis For the Ribosome Functioning As A L-Tryptophan Sensor - Cryo-Em Structure of A Tnac Stalled E.Coli Ribosome also contains other interesting chemical elements:

Magnesium

(Mg)

143 atoms

The binding sites of Zinc atom in the Molecular Basis For the Ribosome Functioning As A L-Tryptophan Sensor - Cryo-Em Structure of A Tnac Stalled E.Coli Ribosome (pdb code 4uy8). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Molecular Basis For the Ribosome Functioning As A L-Tryptophan Sensor - Cryo-Em Structure of A Tnac Stalled E.Coli Ribosome, PDB code: 4uy8:

Zinc binding site 1 out of 1 in the Molecular Basis For the Ribosome Functioning As A L-Tryptophan Sensor - Cryo-Em Structure of A Tnac Stalled E.Coli Ribosome


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Molecular Basis For the Ribosome Functioning As A L-Tryptophan Sensor - Cryo-Em Structure of A Tnac Stalled E.Coli Ribosome within 5.0Å range: probe atom residue distance (Å) B Occ 4:Zn102 b:42.2 occ:1.00 SG 4:CYS11 1.9 28.0 1.0 ND1 4:HIS33 1.9 16.7 1.0 SG 4:CYS27 2.0 25.6 1.0 CB 4:CYS11 2.4 7.4 1.0 SG 4:CYS14 2.4 12.3 1.0 CE1 4:HIS33 2.5 12.8 1.0 CG 4:HIS33 3.1 18.1 1.0 N 4:CYS11 3.3 15.4 1.0 CA 4:CYS11 3.4 12.5 1.0 CB 4:CYS27 3.5 15.7 1.0 NE2 4:HIS33 3.6 13.1 1.0 CB 4:HIS33 3.7 16.9 1.0 CB 4:GLU30 3.8 15.9 1.0 CD2 4:HIS33 3.9 14.8 1.0 CB 4:CYS14 4.2 11.8 1.0 N 4:CYS14 4.3 18.9 1.0 C 4:CYS11 4.4 18.6 1.0 CG 4:GLU30 4.5 16.6 1.0 C 4:LEU10 4.5 11.3 1.0 O 4:GLU30 4.6 12.0 1.0 CB 4:LEU10 4.6 8.1 1.0 CA 4:CYS14 4.7 16.1 1.0 CA 4:CYS27 4.8 16.6 1.0 N 4:GLU30 4.8 22.3 1.0 CA 4:GLU30 4.8 16.5 1.0 O 4:CYS11 4.9 24.9 1.0 C 4:ASN13 5.0 29.4 1.0

L.Bischoff, O.Berninghausen, R.Beckmann. Molecular Basis For the Ribosome Functioning As An L- Tryptophan Sensor. Cell Rep. V. 9 469 2014.
ISSN: ISSN 2211-1247
PubMed: 25310980
DOI: 10.1016/J.CELREP.2014.09.011