Zinc in PDB, part 302 (files: 12041-12080),
PDB 5oik-5ph0
Experimental structures of coordination spheres of Zinc (Zn) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Zinc atoms. PDB files: 12041-12080 (PDB 5oik-5ph0).
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5oik (Zn: 8) - Structure of An Rna Polymerase II-Dsif Transcription Elongation Complex
Other atoms:
Mg (1);
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5oiu (Zn: 6) - Crystal Structure of Pilf Type IV Pilus Assembly Atpase From Thermus Thermophilus
Other atoms:
Mg (6);
Cl (12);
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5oj7 (Zn: 1) - Sirtuin 4 Orthologue From Xenopus Tropicalis in Complex with Adp- Ribose
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5ojh (Zn: 1) - Crystal Structure of the Extramembrane Domain of the Cellulose Biosynthetic Protein Bcsg From Salmonella Typhimurium
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5ojj (Zn: 8) - Crystal Structure of the Zn-Bound Ubiquitin-Conjugating Enzyme UBE2T
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5ojn (Zn: 1) - Sirtuin 4 From Xenopus Tropicalis in Complex with Thioacetyl-Adp- Ribose
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5ojo (Zn: 2) - Sirtuin 5 From Danio Rerio in Complex with 3-Hydroxy-3-Methylglutaryl- CPS1 Peptide
Other atoms:
Na (1);
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5ol0 (Zn: 2) - Structure of Leishmania Infantum Silent Information Regulator 2 Related Protein 1 (LISIR2RP1) in Complex with Acetylated P53 Peptide
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5olb (Zn: 2) - Crystal Structure of Autotaxin in Complex with Pf-8380
Other atoms:
K (1);
Ca (2);
Cl (3);
Na (2);
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5olm (Zn: 8) - TRIM21
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5olt (Zn: 1) - Crystal Structure of the Extramembrane Domain of the Cellulose Biosynthetic Protein Bcsg From Salmonella Typhimurium
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5om9 (Zn: 3) - Crystal Structure of the Human Carboxypeptidase A1 in Complex with A Thiirane Mechanism-Based Inhibitor
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5omw (Zn: 2) - Mutant T252A of E. Coli Leucyl-Trna Synthetase, Trna(Leu) and Leucyl- Adenylate Analogue in the Aminoacylation Conformation
Other atoms:
Mg (2);
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5on2 (Zn: 2) - Quaternary Complex of Mutant T252A of E. Coli Leucyl-Trna Synthetase with Trna(Leu), Leucyl-Adenylate Analogue, and Post-Transfer Editing Analogue of Norvaline in the Aminoacylation Conformation
Other atoms:
Mg (2);
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5on3 (Zn: 1) - Quaternary Complex of Mutant T252A of E. Coli Leucyl-Trna Synthetase with Trna(Leu), Leucyl-Adenylate Analogue, and Post-Transfer Editing Analogue of Leucine in the Aminoacylation Conformation
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5onh (Zn: 2) - Quaternary Complex of Wild Type E. Coli Leucyl-Trna Synthetase with Trna(Leu), Leucyl-Adenylate Analogue, and Post-Transfer Editing Analogue of Norvaline in the Aminoacylation Conformation
Other atoms:
Mg (2);
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5onj (Zn: 1) - Yndl in Complex with 5 Amino Acid (Pga) Complex
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5onk (Zn: 1) - Native Yndl
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5onr (Zn: 1) - Alzheimer'S Amyloid-Beta Peptide Fragment 1-40 in Complex with Thermolysin
Other atoms:
Ca (4);
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5ons (Zn: 1) - Crystal Structure of the Minimal Denr-MCTS1 Complex
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5onx (Zn: 1) - Resting State Copper Nitrite Reductase Determined By Serial Femtosecond Rotation Crystallography
Other atoms:
Cu (2);
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5ony (Zn: 1) - As-Isolated Resting State Copper Nitrite Reductase From Achromobacter Xylosoxidans
Other atoms:
Cu (2);
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5ool (Zn: 3) - Structure of A Native Assembly Intermediate of the Human Mitochondrial Ribosome with Unfolded Interfacial Rrna
Other atoms:
Mg (92);
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5oom (Zn: 2) - Structure of A Native Assembly Intermediate of the Human Mitochondrial Ribosome with Unfolded Interfacial Rrna
Other atoms:
Mg (49);
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5op6 (Zn: 1) - Factor Inhibiting Hif (Fih) in Complex with Zinc and GSK128863
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5op8 (Zn: 1) - Factor Inhibiting Hif (Fih) in Complex with Zinc and Molidustat
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5opc (Zn: 1) - Factor Inhibiting Hif (Fih) in Complex with Zinc and Vadadustat
Other atoms:
Cl (2);
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5opj (Zn: 1) - Beta-L-Arabinofuranosidase
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5opz (Zn: 2) - Crystal Structure of Serratia Marcescens L-Ala D-Glu Endopeptidase Chix
Other atoms:
Cl (1);
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5oq1 (Zn: 2) - Crystal Structure of Serratia Marcescens Chix (Used As Mr Model For Superior Pdb 5OPZ)
Other atoms:
Cl (1);
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5oqd (Zn: 12) - PHD2 and Winged-Helix Domain of Polycomblike
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5oqj (Zn: 16) - Structure of Yeast Transcription Pre-Initiation Complex with Tfiih
Other atoms:
Mg (1);
Fe (4);
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5oqm (Zn: 16) - Structure of Yeast Transcription Pre-Initiation Complex with Tfiih and Core Mediator
Other atoms:
Mg (1);
Fe (4);
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5oqw (Zn: 2) - Xiap in Complex with Small Molecule
Other atoms:
F (2);
Na (1);
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5ot2 (Zn: 8) - Rna Polymerase II Elongation Complex in the Presence of 3D-Napht-A
Other atoms:
Mg (1);
Br (1);
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5ow3 (Zn: 3) - Crystal Structure of A C-Terminally Truncated Trimeric Ectodomain of the Arabidopsis Thaliana Gamete Fusion Protein HAP2
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5ows (Zn: 2) - Crystal Structure of TNKS2 in Complex with 2-[4-(4-Methyl-2- Oxoimidazolidin-4-Yl)Phenyl]-3,4-Dihydroquinazolin-4-One
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5owt (Zn: 2) - Crystal Structure of TNKS2 in Complex with (5S)-5-Methyl-5-[4-(4-Oxo- 3,4-Dihydroquinazolin-2-Yl)Phenyl]Imidazolidine-2,4-Dione
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5oy3 (Zn: 1) - The Structural Basis of the Histone Demethylase KDM6B Histone 3 Lysine 27 Specificity
Other atoms:
Fe (1);
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5ph0 (Zn: 1) - Pandda Analysis Group Deposition -- Crystal Structure of JMJD2D in Complex with N09484A
Other atoms:
F (3);
Ni (1);
Mg (1);
Page generated: Mon Dec 15 11:35:44 2025
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