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Zinc in PDB 8rlz: uc(Nmr) Solution Structure of the N-Terminal Cytoplasmic Domain, Ddvant, of the Membrane Antisigma Factor Ddva

Zinc Binding Sites:

The binding sites of Zinc atom in the uc(Nmr) Solution Structure of the N-Terminal Cytoplasmic Domain, Ddvant, of the Membrane Antisigma Factor Ddva (pdb code 8rlz). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the uc(Nmr) Solution Structure of the N-Terminal Cytoplasmic Domain, Ddvant, of the Membrane Antisigma Factor Ddva, PDB code: 8rlz:

Zinc binding site 1 out of 1 in 8rlz

Go back to Zinc Binding Sites List in 8rlz
Zinc binding site 1 out of 1 in the uc(Nmr) Solution Structure of the N-Terminal Cytoplasmic Domain, Ddvant, of the Membrane Antisigma Factor Ddva


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of uc(Nmr) Solution Structure of the N-Terminal Cytoplasmic Domain, Ddvant, of the Membrane Antisigma Factor Ddva within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn101

b:0.0
occ:1.00
HE2 A:HIS28 2.1 0.0 1.0
NE2 A:HIS28 2.2 0.0 1.0
SG A:CYS35 2.4 0.0 1.0
SG A:CYS6 2.5 0.0 1.0
SG A:CYS32 2.5 0.0 1.0
CD2 A:HIS28 2.7 0.0 1.0
HD2 A:HIS28 2.9 0.0 1.0
CE1 A:HIS28 3.2 0.0 1.0
HB3 A:CYS32 3.3 0.0 1.0
HA A:CYS6 3.4 0.0 1.0
CB A:CYS32 3.4 0.0 1.0
CB A:CYS6 3.6 0.0 1.0
CB A:CYS35 3.6 0.0 1.0
HB2 A:CYS32 3.6 0.0 1.0
H A:CYS35 3.6 0.0 1.0
HB2 A:CYS6 3.7 0.0 1.0
HB2 A:CYS35 3.7 0.0 1.0
HE1 A:HIS28 3.7 0.0 1.0
O A:HIS28 3.7 0.0 1.0
CG A:HIS28 3.8 0.0 1.0
HB3 A:LYS34 3.9 0.0 1.0
N A:CYS35 3.9 0.0 1.0
ND1 A:HIS28 4.0 0.0 1.0
CA A:CYS6 4.0 0.0 1.0
CA A:CYS35 4.2 0.0 1.0
HA A:CYS35 4.2 0.0 1.0
HB3 A:CYS35 4.5 0.0 1.0
HB3 A:CYS6 4.5 0.0 1.0
N A:CYS6 4.6 0.0 1.0
C A:HIS28 4.7 0.0 1.0
HD2 A:LYS34 4.8 0.0 1.0
C A:LYS34 4.8 0.0 1.0
H A:CYS6 4.8 0.0 1.0
CA A:CYS32 4.9 0.0 1.0
HD1 A:HIS28 4.9 0.0 1.0
CB A:LYS34 4.9 0.0 1.0
HA A:LEU29 5.0 0.0 1.0
CB A:HIS28 5.0 0.0 1.0

Reference:

D.Bernal-Bernal, D.Pantoja-Uceda, J.P.Lopez-Alonso, A.Lopez-Rojo, J.A.Lopez-Ruiz, M.Galbis-Martinez, B.Ochoa-Lizarralde, I.Tascon, M.Elias-Arnanz, I.Ubarretxena-Belandia, S.Padmanabhan. Structural Basis For Regulation of A Cbass-Crispr-Cas Defense Island By A Transmembrane Anti-Sigma Factor and Its Ecf Sigma Partner. Sci Adv V. 10 P1053 2024.
ISSN: ESSN 2375-2548
PubMed: 39454004
DOI: 10.1126/SCIADV.ADP1053
Page generated: Wed Nov 13 13:42:16 2024

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