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Zinc in PDB 8qvo: L211Q, L254N, T262G Mutant of Carboxypeptidase T From Thermoactinomyces Vulgaris

Protein crystallography data

The structure of L211Q, L254N, T262G Mutant of Carboxypeptidase T From Thermoactinomyces Vulgaris, PDB code: 8qvo was solved by V.I.Timofeev, P.V.Dorovatovskii, V.A.Lazarenko, V.K.Akparov, I.P.Kuranova, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.91 / 1.96
Space group P 63 2 2
Cell size a, b, c (Å), α, β, γ (°) 158.085, 158.085, 104.589, 90, 90, 120
R / Rfree (%) 14.6 / 16.6

Other elements in 8qvo:

The structure of L211Q, L254N, T262G Mutant of Carboxypeptidase T From Thermoactinomyces Vulgaris also contains other interesting chemical elements:

Calcium (Ca) 5 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the L211Q, L254N, T262G Mutant of Carboxypeptidase T From Thermoactinomyces Vulgaris (pdb code 8qvo). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the L211Q, L254N, T262G Mutant of Carboxypeptidase T From Thermoactinomyces Vulgaris, PDB code: 8qvo:

Zinc binding site 1 out of 1 in 8qvo

Go back to Zinc Binding Sites List in 8qvo
Zinc binding site 1 out of 1 in the L211Q, L254N, T262G Mutant of Carboxypeptidase T From Thermoactinomyces Vulgaris


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of L211Q, L254N, T262G Mutant of Carboxypeptidase T From Thermoactinomyces Vulgaris within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:11.5
occ:1.00
O A:HOH762 2.1 15.8 1.0
ND1 A:HIS69 2.1 10.9 1.0
ND1 A:HIS204 2.1 9.4 1.0
OE1 A:GLU72 2.2 10.0 1.0
OE2 A:GLU72 2.3 10.6 1.0
CD A:GLU72 2.5 10.5 1.0
CE1 A:HIS69 3.0 10.3 1.0
CE1 A:HIS204 3.0 10.0 1.0
CG A:HIS204 3.1 9.2 1.0
CG A:HIS69 3.1 10.4 1.0
CB A:HIS204 3.4 9.9 1.0
CB A:HIS69 3.5 10.2 1.0
O A:HOH706 3.9 11.2 1.0
O A:THR205 3.9 10.6 1.0
CG A:GLU72 4.1 10.1 1.0
O2 A:SO4402 4.1 17.4 1.0
NE2 A:HIS69 4.2 10.1 1.0
CA A:HIS204 4.2 10.2 1.0
O4 A:SO4402 4.2 15.7 1.0
NE2 A:HIS204 4.2 9.1 1.0
CD2 A:HIS204 4.2 8.9 1.0
CD2 A:HIS69 4.2 11.7 1.0
O A:HOH775 4.2 40.8 1.0
O A:HOH593 4.4 13.7 1.0
OE2 A:GLU277 4.4 20.9 1.0
NH1 A:ARG129 4.5 13.4 1.0
N A:THR205 4.5 10.2 1.0
S A:SO4402 4.5 18.1 1.0
O1 A:SO4402 4.6 13.7 1.0
CA A:HIS69 4.8 9.8 1.0
OE1 A:GLU277 4.8 15.6 1.0
N A:HIS69 4.8 10.0 1.0
CB A:GLU72 4.9 9.6 1.0
C A:HIS204 4.9 10.8 1.0

Reference:

V.I.Timofeev, P.V.Dorovatovskii, V.A.Lazarenko, V.K.Akparov, I.P.Kuranova. L211Q, L254N, T262G Mutant of Carboxypeptidase T From Thermoactinomyces Vulgaris To Be Published.
Page generated: Thu Oct 31 10:19:29 2024

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