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Zinc in PDB 8oxo: Atm(Q2971A) Dimeric C-Terminal Region Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide

Enzymatic activity of Atm(Q2971A) Dimeric C-Terminal Region Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide

All present enzymatic activity of Atm(Q2971A) Dimeric C-Terminal Region Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide:
2.7.11.1;

Other elements in 8oxo:

The structure of Atm(Q2971A) Dimeric C-Terminal Region Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Atm(Q2971A) Dimeric C-Terminal Region Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide (pdb code 8oxo). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Atm(Q2971A) Dimeric C-Terminal Region Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide, PDB code: 8oxo:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 8oxo

Go back to Zinc Binding Sites List in 8oxo
Zinc binding site 1 out of 2 in the Atm(Q2971A) Dimeric C-Terminal Region Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Atm(Q2971A) Dimeric C-Terminal Region Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn3103

b:330.7
occ:1.00
NE2 A:HIS1876 2.3 210.1 1.0
SG A:CYS1899 2.3 257.8 1.0
SG A:CYS1900 2.3 246.4 1.0
N A:CYS1900 2.8 246.3 1.0
C A:CYS1899 2.9 251.7 1.0
CB A:CYS1900 2.9 244.7 1.0
CD2 A:HIS1876 3.0 207.6 1.0
CA A:CYS1899 3.3 250.6 1.0
CB A:CYS1899 3.4 251.2 1.0
O A:CYS1899 3.4 251.1 1.0
CA A:CYS1900 3.4 245.1 1.0
CE1 A:HIS1876 3.4 209.4 1.0
CG A:HIS1876 4.3 208.2 1.0
ND1 A:HIS1876 4.4 209.7 1.0
N A:CYS1899 4.7 249.3 1.0
C A:CYS1900 4.7 245.1 1.0

Zinc binding site 2 out of 2 in 8oxo

Go back to Zinc Binding Sites List in 8oxo
Zinc binding site 2 out of 2 in the Atm(Q2971A) Dimeric C-Terminal Region Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Atm(Q2971A) Dimeric C-Terminal Region Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn3103

b:335.3
occ:1.00
NE2 B:HIS1876 2.3 218.0 1.0
SG B:CYS1899 2.3 247.0 1.0
SG B:CYS1900 2.3 243.4 1.0
CD2 B:HIS1876 2.8 215.1 1.0
C B:CYS1899 3.0 240.8 1.0
N B:CYS1900 3.0 241.9 1.0
CB B:CYS1900 3.0 241.1 1.0
CA B:CYS1899 3.3 239.9 1.0
CB B:CYS1899 3.4 240.0 1.0
O B:CYS1899 3.4 239.7 1.0
CE1 B:HIS1876 3.5 216.2 1.0
CA B:CYS1900 3.6 240.9 1.0
CG B:HIS1876 4.1 214.5 1.0
ND1 B:HIS1876 4.4 216.1 1.0
O B:ARG1875 4.6 183.9 1.0
N B:CYS1899 4.8 239.0 1.0
C B:CYS1900 4.8 241.0 1.0

Reference:

A.C.Howes, O.Perisic, R.L.Williams. Structural Insights Into the Activation of Ataxia-Telangiectasia Mutated By Oxidative Stress To Be Published.
Page generated: Thu Dec 28 13:31:57 2023

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