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Zinc in PDB 7syw: Structure of the Wt Ires EIF5B-Containing 48S Initiation Complex, Closed Conformation. Structure 15(Wt)

Other elements in 7syw:

The structure of Structure of the Wt Ires EIF5B-Containing 48S Initiation Complex, Closed Conformation. Structure 15(Wt) also contains other interesting chemical elements:

Magnesium (Mg) 1 atom
Sodium (Na) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of the Wt Ires EIF5B-Containing 48S Initiation Complex, Closed Conformation. Structure 15(Wt) (pdb code 7syw). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of the Wt Ires EIF5B-Containing 48S Initiation Complex, Closed Conformation. Structure 15(Wt), PDB code: 7syw:

Zinc binding site 1 out of 1 in 7syw

Go back to Zinc Binding Sites List in 7syw
Zinc binding site 1 out of 1 in the Structure of the Wt Ires EIF5B-Containing 48S Initiation Complex, Closed Conformation. Structure 15(Wt)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of the Wt Ires EIF5B-Containing 48S Initiation Complex, Closed Conformation. Structure 15(Wt) within 5.0Å range:
probe atom residue distance (Å) B Occ
b:Zn201

b:66.9
occ:1.00
CB b:CYS26 2.2 43.6 1.0
SG b:CYS26 2.2 43.6 1.0
SG b:CYS74 2.2 38.0 1.0
SG b:CYS77 2.2 36.2 1.0
SG b:CYS23 2.3 42.2 1.0
CB b:CYS23 2.9 42.2 1.0
N b:CYS26 3.0 43.6 1.0
CA b:CYS26 3.1 43.6 1.0
CB b:CYS77 3.3 36.2 1.0
CB b:CYS74 3.8 38.0 1.0
C b:CYS26 4.0 43.6 1.0
C b:ASN25 4.2 43.3 1.0
CA b:CYS23 4.4 42.2 1.0
N b:CYS74 4.4 38.0 1.0
O b:CYS26 4.5 43.6 1.0
N b:ALA27 4.6 37.1 1.0
N b:ASN25 4.6 43.3 1.0
CB b:ASN25 4.6 43.3 1.0
CA b:CYS74 4.7 38.0 1.0
CA b:ASN25 4.7 43.3 1.0
CA b:CYS77 4.7 36.2 1.0
CB b:ARG28 4.8 38.5 1.0
C b:CYS23 4.8 42.2 1.0
N b:ARG28 4.8 38.5 1.0
N b:THR24 4.9 39.5 1.0

Reference:

Z.P.Brown, I.S.Abaeva, S.De, C.U.T.Hellen, T.V.Pestova, J.Frank. Comprehensive Structural Overview of the Hcv Ires-Mediated Translation Initiation Pathway To Be Published.
Page generated: Wed Oct 30 11:22:57 2024

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