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Zinc in PDB 7dqa: Cryo-Em Structure of Sars-COV2 Rbd-ACE2 Complex

Enzymatic activity of Cryo-Em Structure of Sars-COV2 Rbd-ACE2 Complex

All present enzymatic activity of Cryo-Em Structure of Sars-COV2 Rbd-ACE2 Complex:
3.4.17.23;

Other elements in 7dqa:

The structure of Cryo-Em Structure of Sars-COV2 Rbd-ACE2 Complex also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Cryo-Em Structure of Sars-COV2 Rbd-ACE2 Complex (pdb code 7dqa). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cryo-Em Structure of Sars-COV2 Rbd-ACE2 Complex, PDB code: 7dqa:

Zinc binding site 1 out of 1 in 7dqa

Go back to Zinc Binding Sites List in 7dqa
Zinc binding site 1 out of 1 in the Cryo-Em Structure of Sars-COV2 Rbd-ACE2 Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryo-Em Structure of Sars-COV2 Rbd-ACE2 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn901

b:81.9
occ:1.00
OE1 A:GLU402 1.9 41.5 1.0
NE2 A:HIS374 2.1 43.3 1.0
OE2 A:GLU402 2.1 41.5 1.0
CD A:GLU402 2.3 41.5 1.0
CE1 A:HIS374 2.6 43.3 1.0
NE2 A:HIS378 3.0 45.4 1.0
CD2 A:HIS374 3.2 43.3 1.0
ND1 A:HIS374 3.7 43.3 1.0
CD2 A:HIS378 3.8 45.4 1.0
CG A:GLU402 3.8 41.5 1.0
CE1 A:HIS378 4.0 45.4 1.0
CG A:HIS374 4.0 43.3 1.0
OE2 A:GLU375 4.3 45.2 1.0
CB A:GLU402 4.7 41.5 1.0
CA A:GLU402 4.9 41.5 1.0

Reference:

N.Liu, L.M.Zheng, J.Xu, J.Wang, C.X.Hu, J.Lan, X.Zhang, J.C.Zhang, K.Xu, H.Cheng, Z.Yang, X.Gao, X.Q.Wang, H.L.Peng, Y.N.Chen, H.W.Wang. Reduced Graphene Oxide Membrane As Supporting Film For High-Resolution Cryo-Em To Be Published.
Page generated: Thu Mar 31 05:21:53 2022

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