Zinc in PDB 7d4p: Structure of Human TRPC5 in Complex with Clemizole

The structure of Structure of Human TRPC5 in Complex with Clemizole also contains other interesting chemical elements:

Calcium	(Ca)	4 atoms
Chlorine	(Cl)	4 atoms

The binding sites of Zinc atom in the Structure of Human TRPC5 in Complex with Clemizole (pdb code 7d4p). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 4 binding sites of Zinc where determined in the Structure of Human TRPC5 in Complex with Clemizole, PDB code: 7d4p:
Jump to Zinc binding site number: 1; 2; 3; 4;

Zinc binding site 1 out of 4 in the Structure of Human TRPC5 in Complex with Clemizole


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of Human TRPC5 in Complex with Clemizole within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn805 b:198.4 occ:1.00 ND1 A:HIS172 2.1 149.3 1.0 SG A:CYS178 2.3 161.9 1.0 SG A:CYS181 2.3 162.2 1.0 SG A:CYS176 2.3 147.9 1.0 CE1 A:HIS172 3.0 142.8 1.0 CG A:HIS172 3.1 137.4 1.0 CB A:CYS181 3.4 148.6 1.0 CB A:CYS178 3.4 158.5 1.0 CB A:HIS172 3.5 133.9 1.0 CB A:CYS176 3.6 141.3 1.0 N A:CYS178 4.1 148.0 1.0 N A:CYS181 4.1 149.7 1.0 NE2 A:HIS172 4.1 136.1 1.0 CD2 A:HIS172 4.2 131.3 1.0 CA A:CYS178 4.3 152.7 1.0 CA A:CYS181 4.3 143.6 1.0 C A:CYS178 4.8 151.5 1.0 CA A:CYS176 4.8 143.2 1.0 C A:CYS176 4.8 149.6 1.0 O A:CYS178 4.9 149.5 1.0 CA A:HIS172 5.0 127.3 1.0 N A:ASN177 5.0 152.8 1.0

Zinc binding site 2 out of 4 in the Structure of Human TRPC5 in Complex with Clemizole


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure of Human TRPC5 in Complex with Clemizole within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn805 b:198.4 occ:1.00 ND1 B:HIS172 2.1 149.3 1.0 SG B:CYS178 2.3 161.9 1.0 SG B:CYS181 2.3 162.2 1.0 SG B:CYS176 2.3 147.9 1.0 CE1 B:HIS172 3.0 142.8 1.0 CG B:HIS172 3.1 137.4 1.0 CB B:CYS181 3.4 148.6 1.0 CB B:CYS178 3.4 158.5 1.0 CB B:HIS172 3.5 133.9 1.0 CB B:CYS176 3.6 141.3 1.0 N B:CYS178 4.1 148.0 1.0 N B:CYS181 4.1 149.7 1.0 NE2 B:HIS172 4.1 136.1 1.0 CD2 B:HIS172 4.2 131.3 1.0 CA B:CYS178 4.3 152.7 1.0 CA B:CYS181 4.3 143.6 1.0 C B:CYS178 4.8 151.5 1.0 CA B:CYS176 4.8 143.2 1.0 C B:CYS176 4.8 149.6 1.0 O B:CYS178 4.9 149.5 1.0 CA B:HIS172 5.0 127.3 1.0 N B:ASN177 5.0 152.8 1.0

Zinc binding site 3 out of 4 in the Structure of Human TRPC5 in Complex with Clemizole


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Structure of Human TRPC5 in Complex with Clemizole within 5.0Å range: probe atom residue distance (Å) B Occ C:Zn805 b:198.4 occ:1.00 ND1 C:HIS172 2.1 149.3 1.0 SG C:CYS178 2.3 161.9 1.0 SG C:CYS181 2.3 162.2 1.0 SG C:CYS176 2.3 147.9 1.0 CE1 C:HIS172 3.0 142.8 1.0 CG C:HIS172 3.1 137.4 1.0 CB C:CYS181 3.4 148.6 1.0 CB C:CYS178 3.4 158.5 1.0 CB C:HIS172 3.5 133.9 1.0 CB C:CYS176 3.6 141.3 1.0 N C:CYS178 4.1 148.0 1.0 N C:CYS181 4.1 149.7 1.0 NE2 C:HIS172 4.1 136.1 1.0 CD2 C:HIS172 4.2 131.3 1.0 CA C:CYS178 4.3 152.7 1.0 CA C:CYS181 4.3 143.6 1.0 C C:CYS178 4.8 151.5 1.0 CA C:CYS176 4.8 143.2 1.0 C C:CYS176 4.8 149.6 1.0 O C:CYS178 4.9 149.5 1.0 CA C:HIS172 5.0 127.3 1.0 N C:ASN177 5.0 152.8 1.0

Zinc binding site 4 out of 4 in the Structure of Human TRPC5 in Complex with Clemizole


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 4 of Structure of Human TRPC5 in Complex with Clemizole within 5.0Å range: probe atom residue distance (Å) B Occ D:Zn805 b:198.4 occ:1.00 ND1 D:HIS172 2.1 149.3 1.0 SG D:CYS178 2.3 161.9 1.0 SG D:CYS181 2.3 162.2 1.0 SG D:CYS176 2.3 147.9 1.0 CE1 D:HIS172 3.0 142.8 1.0 CG D:HIS172 3.1 137.4 1.0 CB D:CYS181 3.4 148.6 1.0 CB D:CYS178 3.4 158.5 1.0 CB D:HIS172 3.5 133.9 1.0 CB D:CYS176 3.6 141.3 1.0 N D:CYS178 4.1 148.0 1.0 N D:CYS181 4.1 149.7 1.0 NE2 D:HIS172 4.1 136.1 1.0 CD2 D:HIS172 4.2 131.3 1.0 CA D:CYS178 4.3 152.7 1.0 CA D:CYS181 4.3 143.6 1.0 C D:CYS178 4.8 151.5 1.0 CA D:CYS176 4.8 143.2 1.0 C D:CYS176 4.8 149.6 1.0 O D:CYS178 4.9 149.5 1.0 CA D:HIS172 5.0 127.3 1.0 N D:ASN177 5.0 152.8 1.0

L.Chen, K.Song, M.Wei, W.Guo. Structure of Human TRPC5 in Complex with Clemizole To Be Published.