Zinc in PDB 6znm: The Pointed End Complex of Dynactin Bound to BICDR1

The binding sites of Zinc atom in the The Pointed End Complex of Dynactin Bound to BICDR1 (pdb code 6znm). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 3 binding sites of Zinc where determined in the The Pointed End Complex of Dynactin Bound to BICDR1, PDB code: 6znm:
Jump to Zinc binding site number: 1; 2; 3;

Zinc binding site 1 out of 3 in the The Pointed End Complex of Dynactin Bound to BICDR1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The Pointed End Complex of Dynactin Bound to BICDR1 within 5.0Å range: probe atom residue distance (Å) B Occ Y:Zn501 b:0.4 occ:1.00 NH1 Y:ARG37 1.8 0.9 1.0 SG Y:CYS287 2.3 0.6 1.0 SG Y:CYS33 2.4 1.0 1.0 CZ Y:ARG37 2.7 0.9 1.0 CB Y:CYS30 2.9 0.7 1.0 NH2 Y:ARG37 3.1 0.9 1.0 SG Y:CYS30 3.5 0.7 1.0 CB Y:CYS287 3.6 0.6 1.0 CB Y:CYS33 3.9 1.0 1.0 NE Y:ARG37 3.9 0.9 1.0 N Y:CYS287 4.1 0.6 1.0 O Y:GLU35 4.3 1.0 1.0 CA Y:CYS30 4.3 0.7 1.0 CA Y:CYS287 4.4 0.6 1.0 N Y:CYS33 4.5 1.0 1.0 CB Y:GLN286 4.7 0.4 1.0 CA Y:CYS33 4.7 1.0 1.0 C Y:CYS30 4.7 0.7 1.0 O Y:CYS30 4.8 0.7 1.0 CB Y:CYS284 4.9 0.4 1.0 SG Y:CYS284 4.9 0.4 1.0

Zinc binding site 2 out of 3 in the The Pointed End Complex of Dynactin Bound to BICDR1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of The Pointed End Complex of Dynactin Bound to BICDR1 within 5.0Å range: probe atom residue distance (Å) B Occ Y:Zn502 b:0.7 occ:1.00 SG Y:CYS51 2.4 0.5 1.0 SG Y:CYS70 2.5 0.8 1.0 CB Y:CYS51 2.9 0.5 1.0 CB Y:CYS73 3.0 1.0 1.0 CB Y:CYS70 3.2 0.8 1.0 CB Y:CYS54 3.4 0.3 1.0 O Y:CYS54 3.5 0.3 1.0 N Y:CYS54 3.7 0.3 1.0 CA Y:CYS54 3.9 0.3 1.0 SG Y:CYS54 4.0 0.3 1.0 N Y:CYS73 4.1 1.0 1.0 SG Y:CYS73 4.1 1.0 1.0 CA Y:CYS73 4.2 1.0 1.0 C Y:CYS54 4.2 0.3 1.0 CA Y:CYS51 4.4 0.5 1.0 CA Y:CYS70 4.7 0.8 1.0 CB Y:SER53 4.7 0.6 1.0 C Y:SER53 4.8 0.6 1.0 C Y:CYS51 5.0 0.5 1.0

Zinc binding site 3 out of 3 in the The Pointed End Complex of Dynactin Bound to BICDR1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of The Pointed End Complex of Dynactin Bound to BICDR1 within 5.0Å range: probe atom residue distance (Å) B Occ Y:Zn503 b:0.1 occ:1.00 SG Y:CYS114 1.9 0.4 1.0 SG Y:CYS76 2.8 0.5 1.0 SG Y:CYS111 3.1 0.9 1.0 CB Y:CYS76 3.3 0.5 1.0 CB Y:CYS79 3.3 0.9 1.0 N Y:CYS79 3.4 0.9 1.0 CB Y:CYS111 3.5 0.9 1.0 O Y:CYS79 3.6 0.9 1.0 CB Y:CYS114 3.7 0.4 1.0 CA Y:CYS79 3.7 0.9 1.0 C Y:CYS79 3.9 0.9 1.0 SG Y:CYS79 4.3 0.9 1.0 O Y:CYS114 4.5 0.4 1.0 N Y:CYS114 4.5 0.4 1.0 C Y:GLY78 4.5 0.4 1.0 CA Y:CYS114 4.5 0.4 1.0 CB Y:TRP116 4.7 0.1 1.0 CA Y:CYS76 4.7 0.5 1.0 CA Y:GLY78 4.8 0.4 1.0 C Y:CYS114 4.8 0.4 1.0 N Y:GLY78 4.8 0.4 1.0 CA Y:CYS111 5.0 0.9 1.0

C.K.Lau, F.J.O'reilly, B.Santhanam, S.E.Lacey, J.Rappsilber, A.P.Carter. Cryo-Em Reveals the Complex Architecture of the Shoulder and Pointed End of Dynactin To Be Published.