Zinc in PDB 6yxf: Cryogenic Human Adiponectin Receptor 2 (ADIPOR2) with Gd-DO3 Ligand Determined By Serial Crystallography (Ssx) Using Crystaldirect

The structure of Cryogenic Human Adiponectin Receptor 2 (ADIPOR2) with Gd-DO3 Ligand Determined By Serial Crystallography (Ssx) Using Crystaldirect, PDB code: 6yxf was solved by R.D.Healey, S.Basu, A.S.Humm, C.Leyrat, F.Dupeux, A.Pica, S.Granier, J.A.Marquez, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	48.67 / 3.03
Space group	P 21 2 21
Cell size a, b, c (Å), α, β, γ (°)	74.64, 100.65, 111.2, 90, 90, 90
R / Rfree (%)	21.4 / 25.9

The structure of Cryogenic Human Adiponectin Receptor 2 (ADIPOR2) with Gd-DO3 Ligand Determined By Serial Crystallography (Ssx) Using Crystaldirect also contains other interesting chemical elements:

Gadolinium

(Gd)

3 atoms

The binding sites of Zinc atom in the Cryogenic Human Adiponectin Receptor 2 (ADIPOR2) with Gd-DO3 Ligand Determined By Serial Crystallography (Ssx) Using Crystaldirect (pdb code 6yxf). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cryogenic Human Adiponectin Receptor 2 (ADIPOR2) with Gd-DO3 Ligand Determined By Serial Crystallography (Ssx) Using Crystaldirect, PDB code: 6yxf:

Zinc binding site 1 out of 1 in the Cryogenic Human Adiponectin Receptor 2 (ADIPOR2) with Gd-DO3 Ligand Determined By Serial Crystallography (Ssx) Using Crystaldirect


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryogenic Human Adiponectin Receptor 2 (ADIPOR2) with Gd-DO3 Ligand Determined By Serial Crystallography (Ssx) Using Crystaldirect within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:62.6 occ:1.00 NE2 A:HIS202 2.0 70.2 1.0 NE2 A:HIS348 2.3 74.9 1.0 NE2 A:HIS352 2.3 70.2 1.0 CE1 A:HIS202 2.8 70.1 1.0 CD2 A:HIS348 2.9 73.8 1.0 O2 A:OLA402 3.2 69.8 1.0 CD2 A:HIS202 3.2 69.3 1.0 CE1 A:HIS352 3.3 70.3 1.0 O1 A:OLA402 3.3 70.4 1.0 CD2 A:HIS352 3.4 69.3 1.0 CE1 A:HIS348 3.4 75.3 1.0 C1 A:OLA402 3.6 70.1 1.0 OG A:SER198 3.8 64.7 1.0 ND1 A:HIS202 4.0 69.5 1.0 OD1 A:ASP219 4.0 81.4 1.0 OD2 A:ASP219 4.2 83.8 1.0 CG A:HIS348 4.2 72.8 1.0 CG A:HIS202 4.2 67.7 1.0 ND1 A:HIS352 4.4 70.2 1.0 ND1 A:HIS348 4.4 74.8 1.0 CG A:HIS352 4.5 69.2 1.0 CG A:ASP219 4.5 80.6 1.0 ND2 A:ASN148 4.8 78.7 1.0 ND1 A:HIS152 4.8 76.0 1.0 CB A:SER198 4.9 63.2 1.0 C2 A:OLA402 5.0 69.7 1.0

R.D.Healey, S.Basu, A.S.Humm, C.Leyrat, F.Dupeux, A.Pica, S.Granier, J.A.Marquez. Rapid, Automated Serial Crystallography Analysis of Membrane Proteins Through Crystaldirect To Be Published.