Zinc in PDB 6ypd: Crystal Structure of Ampc From E. Coli with Cyclic Boronate 3 (CB3 / APC308)
Enzymatic activity of Crystal Structure of Ampc From E. Coli with Cyclic Boronate 3 (CB3 / APC308)
All present enzymatic activity of Crystal Structure of Ampc From E. Coli with Cyclic Boronate 3 (CB3 / APC308):
3.5.2.6;
3.5.2.6;
Protein crystallography data
The structure of Crystal Structure of Ampc From E. Coli with Cyclic Boronate 3 (CB3 / APC308), PDB code: 6ypd
was solved by
P.A.Lang,
J.Brem,
C.J.Schofield,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 49.13 / 1.60 |
| Space group | P 43 3 2 |
| Cell size a, b, c (Å), α, β, γ (°) | 138.971, 138.971, 138.971, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 17.1 / 18.7 |
Other elements in 6ypd:
The structure of Crystal Structure of Ampc From E. Coli with Cyclic Boronate 3 (CB3 / APC308) also contains other interesting chemical elements:
| Chlorine | (Cl) | 1 atom |
Zinc Binding Sites:
The binding sites of Zinc atom in the Crystal Structure of Ampc From E. Coli with Cyclic Boronate 3 (CB3 / APC308)
(pdb code 6ypd). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Ampc From E. Coli with Cyclic Boronate 3 (CB3 / APC308), PDB code: 6ypd:
In total only one binding site of Zinc was determined in the Crystal Structure of Ampc From E. Coli with Cyclic Boronate 3 (CB3 / APC308), PDB code: 6ypd:
Zinc binding site 1 out of 1 in 6ypd
Go back to
Zinc Binding Sites List in 6ypd
Zinc binding site 1 out
of 1 in the Crystal Structure of Ampc From E. Coli with Cyclic Boronate 3 (CB3 / APC308)
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Crystal Structure of Ampc From E. Coli with Cyclic Boronate 3 (CB3 / APC308) within 5.0Å range:
|
Reference:
P.A.Lang,
A.Parkova,
T.M.Leissing,
K.Calvopina,
R.Cain,
A.Krajnc,
T.D.Panduwawala,
J.Philippe,
C.W.G.Fishwick,
P.Trapencieris,
M.G.P.Page,
C.J.Schofield,
J.Brem.
Bicyclic Boronates As Potent Inhibitors of Ampc, the Class C Beta-Lactamase From Escherichia Coli Biomolecules 2020.
ISSN: ESSN 2218-273X
DOI: 10.3390/BIOM10060899
Page generated: Wed Dec 16 13:18:31 2020
ISSN: ESSN 2218-273X
DOI: 10.3390/BIOM10060899
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