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Zinc in PDB 6sic: Cryo-Em Structure of the Type III-B Cmr-Beta Bound to Cognate Target Rna

Zinc Binding Sites:

The binding sites of Zinc atom in the Cryo-Em Structure of the Type III-B Cmr-Beta Bound to Cognate Target Rna (pdb code 6sic). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cryo-Em Structure of the Type III-B Cmr-Beta Bound to Cognate Target Rna, PDB code: 6sic:

Zinc binding site 1 out of 1 in 6sic

Go back to Zinc Binding Sites List in 6sic
Zinc binding site 1 out of 1 in the Cryo-Em Structure of the Type III-B Cmr-Beta Bound to Cognate Target Rna


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryo-Em Structure of the Type III-B Cmr-Beta Bound to Cognate Target Rna within 5.0Å range:
probe atom residue distance (Å) B Occ
K:Zn1101

b:30.0
occ:1.00
SG K:CYS512 2.2 0.8 1.0
CB K:CYS512 2.6 0.8 1.0
CB K:CYS464 2.7 0.8 1.0
SG K:CYS464 3.0 0.8 1.0
N K:CYS512 3.0 0.8 1.0
N K:CYS467 3.2 0.2 1.0
CA K:CYS512 3.4 0.8 1.0
CB K:CYS467 3.5 0.2 1.0
SG K:CYS515 3.5 0.8 1.0
SG K:CYS467 3.5 0.2 1.0
CA K:CYS467 3.9 0.2 1.0
CB K:CYS515 3.9 0.8 1.0
C K:SER466 4.1 0.7 1.0
CA K:CYS464 4.1 0.8 1.0
C K:LEU511 4.2 0.0 1.0
N K:SER466 4.2 0.7 1.0
C K:CYS512 4.4 0.8 1.0
CA K:SER466 4.5 0.7 1.0
CA K:LEU511 4.6 0.0 1.0
C K:CYS464 4.6 0.8 1.0
CB K:SER466 4.6 0.7 1.0
N K:CYS515 4.6 0.8 1.0
O K:CYS512 4.6 0.8 1.0
N K:GLY468 4.7 94.3 1.0
CB K:LEU470 4.7 95.6 1.0
N K:THR465 4.7 0.2 1.0
CD1 K:LEU470 4.7 95.6 1.0
C K:CYS467 4.9 0.2 1.0
O K:SER466 4.9 0.7 1.0
CA K:CYS515 4.9 0.8 1.0

Reference:

N.Sofos, M.Feng, S.Stella, T.Pape, A.Fuglsang, J.Lin, Q.Huang, Y.Li, Q.She, G.Montoya. Structures of the Cmr-Beta Complex Reveal the Regulation of the Immunity Mechanism of Type III-B Crispr-Cas. Mol.Cell V. 79 741 2020.
ISSN: ISSN 1097-2765
PubMed: 32730741
DOI: 10.1016/J.MOLCEL.2020.07.008
Page generated: Wed Dec 16 12:48:29 2020

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