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Zinc in PDB 6s1t: Structure of Beta-Fructofuranosidase From Schwanniomyces Occidentalis Complexed with Sucrose

Enzymatic activity of Structure of Beta-Fructofuranosidase From Schwanniomyces Occidentalis Complexed with Sucrose

All present enzymatic activity of Structure of Beta-Fructofuranosidase From Schwanniomyces Occidentalis Complexed with Sucrose:
3.2.1.26;

Protein crystallography data

The structure of Structure of Beta-Fructofuranosidase From Schwanniomyces Occidentalis Complexed with Sucrose, PDB code: 6s1t was solved by E.Jimenez-Ortega, J.Sanz-Aparicio, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.74 / 2.09
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 60.903, 93.201, 116.615, 90, 104.9, 90
R / Rfree (%) 17.5 / 21.4

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of Beta-Fructofuranosidase From Schwanniomyces Occidentalis Complexed with Sucrose (pdb code 6s1t). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of Beta-Fructofuranosidase From Schwanniomyces Occidentalis Complexed with Sucrose, PDB code: 6s1t:

Zinc binding site 1 out of 1 in 6s1t

Go back to Zinc Binding Sites List in 6s1t
Zinc binding site 1 out of 1 in the Structure of Beta-Fructofuranosidase From Schwanniomyces Occidentalis Complexed with Sucrose


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of Beta-Fructofuranosidase From Schwanniomyces Occidentalis Complexed with Sucrose within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn610

b:35.2
occ:0.60
 O A:HOH1025 2.0 26.7 1.0
O B:HOH1009 2.1 34.3 1.0
NE2 B:HIS443 2.5 44.6 1.0
NE2 A:HIS443 2.6 39.0 1.0
CD2 A:HIS443 3.2 35.7 1.0
CD2 B:HIS443 3.2 41.2 1.0
CE1 B:HIS443 3.5 42.5 1.0
CE1 A:HIS443 3.6 39.3 1.0
CG A:HIS443 4.2 32.3 1.0
CG B:HIS443 4.3 36.8 1.0
ND1 A:HIS443 4.4 36.2 1.0
ND1 B:HIS443 4.4 40.6 1.0

Reference:

D.Rodrigo-Frutos, E.Jimenez-Ortega, D.Piedrabuena, M.Ramirez-Escudero, N.Miguez, F.J.Plou, J.Sanz-Aparicio, M.Fernandez-Lobato. New Insights Into the Molecular Mechanism Behind Mannitol and Erythritol Fructosylation By Beta-Fructofuranosidase From Schwanniomyces Occidentalis. Sci Rep V. 11 7158 2021.
ISSN: ESSN 2045-2322
PubMed: 33785821
DOI: 10.1038/S41598-021-86568-6
Page generated: Tue Oct 29 07:00:24 2024

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