Zinc in PDB 6rmg: Structure of PTCH1 Bound to A Modified Hedgehog Ligand Shhn-C24II

The binding sites of Zinc atom in the Structure of PTCH1 Bound to A Modified Hedgehog Ligand Shhn-C24II (pdb code 6rmg). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of PTCH1 Bound to A Modified Hedgehog Ligand Shhn-C24II, PDB code: 6rmg:

Zinc binding site 1 out of 1 in the Structure of PTCH1 Bound to A Modified Hedgehog Ligand Shhn-C24II


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of PTCH1 Bound to A Modified Hedgehog Ligand Shhn-C24II within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn201 b:0.7 occ:1.00 OD1 B:ASP147 2.1 86.8 1.0 OD2 B:ASP147 2.2 86.8 1.0 NE2 B:HIS140 2.2 96.2 1.0 ND1 B:HIS182 2.3 83.8 1.0 CG B:ASP147 2.4 86.8 1.0 HE1 B:HIS182 2.8 83.8 1.0 CE1 B:HIS182 2.8 83.8 1.0 CD2 B:HIS140 3.1 96.2 1.0 CE1 B:HIS140 3.2 96.2 1.0 HD2 B:HIS140 3.2 96.2 1.0 HE1 B:HIS140 3.4 96.2 1.0 HE1 B:HIS134 3.4 98.7 1.0 CG B:HIS182 3.4 83.8 1.0 HB2 B:HIS182 3.6 83.8 1.0 OE1 B:GLU176 3.7 82.8 1.0 CE1 B:HIS134 3.8 98.7 1.0 HE1 B:HIS180 3.9 80.2 1.0 CB B:ASP147 3.9 86.8 1.0 CB B:HIS182 4.0 83.8 1.0 NE2 B:HIS182 4.1 83.8 1.0 HA B:HIS182 4.1 83.8 1.0 ND1 B:HIS134 4.2 98.7 1.0 CG B:HIS140 4.3 96.2 1.0 ND1 B:HIS140 4.3 96.2 1.0 HB2 B:ASP147 4.3 86.8 1.0 CD2 B:HIS182 4.3 83.8 1.0 HB3 B:ASP147 4.4 86.8 1.0 NE2 B:HIS134 4.4 98.7 1.0 HE2 B:HIS134 4.5 98.7 1.0 CE1 B:HIS180 4.6 80.2 1.0 HA B:ASP147 4.6 86.8 1.0 CA B:HIS182 4.6 83.8 1.0 CA B:ASP147 4.7 86.8 1.0 HE2 B:HIS182 4.7 83.8 1.0 CD B:GLU176 4.8 82.8 1.0 N B:ASP147 4.9 86.8 1.0 HB3 B:HIS182 4.9 83.8 1.0 HB1 B:ALA145 4.9 92.8 1.0 HG B:SER138 4.9 0.3 1.0 ND1 B:HIS180 5.0 80.2 1.0 O B:VAL146 5.0 90.2 1.0

C.Qi, G.Di Minin, I.Vercellino, A.Wutz, V.M.Korkhov. Structural Basis of Sterol Recognition By Human Hedgehog Receptor PTCH1. Sci Adv V. 5 W6490 2019.
ISSN: ESSN 2375-2548
PubMed: 31555730
DOI: 10.1126/SCIADV.AAW6490