Zinc in PDB 6k2u: Crystal Structure of THR66 Adp-Ribosylated Ubiquitin

The structure of Crystal Structure of THR66 Adp-Ribosylated Ubiquitin, PDB code: 6k2u was solved by X.Wang, Y.Zhou, Y.Zhu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	45.40 / 2.55
Space group	P 41 3 2
Cell size a, b, c (Å), α, β, γ (°)	101.525, 101.525, 101.525, 90.00, 90.00, 90.00
R / Rfree (%)	23.6 / 24.7

The structure of Crystal Structure of THR66 Adp-Ribosylated Ubiquitin also contains other interesting chemical elements:

Magnesium

(Mg)

2 atoms

The binding sites of Zinc atom in the Crystal Structure of THR66 Adp-Ribosylated Ubiquitin (pdb code 6k2u). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of THR66 Adp-Ribosylated Ubiquitin, PDB code: 6k2u:

Zinc binding site 1 out of 1 in the Crystal Structure of THR66 Adp-Ribosylated Ubiquitin


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of THR66 Adp-Ribosylated Ubiquitin within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn102 b:53.5 occ:1.00 OD2 B:ASP52 2.0 52.4 1.0 OE1 B:GLU24 2.0 49.0 1.0 O B:HOH211 2.1 39.9 1.0 O B:HOH204 2.2 44.7 1.0 CD B:GLU24 2.8 52.2 1.0 OE2 B:GLU24 2.9 49.1 1.0 CG B:ASP52 2.9 47.8 1.0 CB B:ASP52 3.4 50.1 1.0 OD1 B:ASP52 4.0 51.3 1.0 O B:HOH210 4.1 47.7 1.0 OD1 B:ASP39 4.1 48.3 1.0 CG B:GLU24 4.3 39.5 1.0 CB B:GLU24 4.9 44.2 1.0 CA B:ASP52 4.9 50.3 1.0

X.Wang, Y.Zhou, Y.Zhu. Crystal Structure of THR66 Adp-Ribosylated Ubiquitin To Be Published.