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Zinc in PDB 6jdb: Crystal Structure of N-Acetyl Mannosmaine Kinase in Complex with Mannac-6P and Adp From Haemophilus Influenzae

Enzymatic activity of Crystal Structure of N-Acetyl Mannosmaine Kinase in Complex with Mannac-6P and Adp From Haemophilus Influenzae

All present enzymatic activity of Crystal Structure of N-Acetyl Mannosmaine Kinase in Complex with Mannac-6P and Adp From Haemophilus Influenzae:
2.7.1.60;

Protein crystallography data

The structure of Crystal Structure of N-Acetyl Mannosmaine Kinase in Complex with Mannac-6P and Adp From Haemophilus Influenzae, PDB code: 6jdb was solved by G.Thanuja, S.Ramaswamy, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.28 / 2.65
Space group I 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 92.591, 92.591, 183.321, 90.00, 90.00, 90.00
R / Rfree (%) 21.4 / 27.6

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of N-Acetyl Mannosmaine Kinase in Complex with Mannac-6P and Adp From Haemophilus Influenzae (pdb code 6jdb). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of N-Acetyl Mannosmaine Kinase in Complex with Mannac-6P and Adp From Haemophilus Influenzae, PDB code: 6jdb:

Zinc binding site 1 out of 1 in 6jdb

Go back to Zinc Binding Sites List in 6jdb
Zinc binding site 1 out of 1 in the Crystal Structure of N-Acetyl Mannosmaine Kinase in Complex with Mannac-6P and Adp From Haemophilus Influenzae


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of N-Acetyl Mannosmaine Kinase in Complex with Mannac-6P and Adp From Haemophilus Influenzae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn303

b:59.0
occ:1.00
 ND1 A:HIS156 2.0 52.7 1.0
SG A:CYS166 2.4 53.0 1.0
SG A:CYS168 2.4 53.0 1.0
SG A:CYS173 2.5 50.6 1.0
CE1 A:HIS156 2.9 52.7 1.0
CG A:HIS156 3.0 51.7 1.0
CB A:CYS168 3.2 48.1 1.0
CB A:CYS166 3.2 47.4 1.0
CB A:HIS156 3.4 52.0 1.0
CB A:CYS173 3.4 47.1 1.0
CA A:HIS156 4.0 47.1 1.0
NE2 A:HIS156 4.1 56.2 1.0
N A:CYS168 4.1 50.8 1.0
CD2 A:HIS156 4.1 52.4 1.0
CA A:CYS168 4.2 51.3 1.0
CA A:CYS166 4.6 47.3 1.0
CB A:ARG170 4.7 47.4 1.0
C A:CYS166 4.8 53.5 1.0
O A:ARG170 4.8 50.0 1.0
O A:GLY155 4.8 49.9 1.0
CA A:CYS173 4.9 46.9 1.0
C A:CYS168 5.0 46.9 1.0
N A:ARG170 5.0 49.3 1.0

Reference:

G.Thanuja, S.Ramaswamy. Crystal Structure of N-Acetyl Mannosmaine Kinase in Complex with Mannac-6P and Adp From Haemophilus Influenzae To Be Published.
Page generated: Tue Oct 29 01:01:36 2024

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