Zinc in PDB 6ir8: Rice Wrky/Dna Complex

The structure of Rice Wrky/Dna Complex, PDB code: 6ir8 was solved by J.Liu, X.Cheng, D.Wang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	43.92 / 2.30
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	48.225, 87.831, 99.691, 90.00, 90.00, 90.00
R / Rfree (%)	19.3 / 24.4

The binding sites of Zinc atom in the Rice Wrky/Dna Complex (pdb code 6ir8). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Rice Wrky/Dna Complex, PDB code: 6ir8:

Zinc binding site 1 out of 1 in the Rice Wrky/Dna Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Rice Wrky/Dna Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn201 b:16.9 occ:1.00 SG A:CYS143 2.3 19.8 1.0 CB A:CYS143 3.3 16.1 1.0 CA A:CYS143 4.7 16.1 1.0 CB A:HIS145 4.7 21.0 1.0

X.Cheng, Y.Zhao, Q.Jiang, J.Yang, W.Zhao, I.A.Taylor, Y.L.Peng, D.Wang, J.Liu. Structural Basis of Dimerization and Dual W-Box Dna Recognition By Rice Wrky Domain. Nucleic Acids Res. V. 47 4308 2019.
ISSN: ESSN 1362-4962
PubMed: 30783673
DOI: 10.1093/NAR/GKZ113