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Zinc in PDB 6h7c: Trna Guanine Transglycosylase H333A Mutant Apo Structure

Enzymatic activity of Trna Guanine Transglycosylase H333A Mutant Apo Structure

All present enzymatic activity of Trna Guanine Transglycosylase H333A Mutant Apo Structure:
2.4.2.29;

Protein crystallography data

The structure of Trna Guanine Transglycosylase H333A Mutant Apo Structure, PDB code: 6h7c was solved by T.X.P.Nguyen, A.Heine, G.Klebe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.47 / 1.68
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 91.296, 65.013, 70.488, 90.00, 95.88, 90.00
R / Rfree (%) 16 / 18.4

Zinc Binding Sites:

The binding sites of Zinc atom in the Trna Guanine Transglycosylase H333A Mutant Apo Structure (pdb code 6h7c). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Trna Guanine Transglycosylase H333A Mutant Apo Structure, PDB code: 6h7c:

Zinc binding site 1 out of 1 in 6h7c

Go back to Zinc Binding Sites List in 6h7c
Zinc binding site 1 out of 1 in the Trna Guanine Transglycosylase H333A Mutant Apo Structure


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Trna Guanine Transglycosylase H333A Mutant Apo Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn405

b:14.8
occ:1.00
ND1 A:HIS349 2.1 13.8 1.0
SG A:CYS323 2.3 14.4 1.0
SG A:CYS318 2.3 16.7 1.0
SG A:CYS320 2.3 14.7 1.0
CE1 A:HIS349 2.9 12.9 1.0
CG A:HIS349 3.3 13.3 1.0
CB A:CYS318 3.3 16.6 1.0
CB A:CYS323 3.3 14.9 1.0
CB A:CYS320 3.4 13.4 1.0
CB A:HIS349 3.7 12.0 1.0
N A:CYS323 3.9 15.6 1.0
NE2 A:HIS349 4.1 12.8 1.0
CA A:HIS349 4.1 11.0 1.0
N A:CYS320 4.2 15.4 1.0
CA A:CYS323 4.2 16.0 1.0
CA A:CYS320 4.3 15.5 1.0
CD2 A:HIS349 4.3 12.5 1.0
O A:HIS349 4.5 12.3 1.0
CA A:CYS318 4.6 17.4 1.0
C A:CYS320 4.7 17.6 1.0
O A:CYS320 4.7 17.3 1.0
C A:CYS318 4.7 17.8 1.0
C A:HIS349 4.8 14.0 1.0
CB A:VAL322 4.8 14.3 1.0
O A:CYS318 4.9 20.6 1.0
C A:VAL322 4.9 16.8 1.0

Reference:

T.X.P.Nguyen, A.Heine, G.Klebe. Trna Guanine Transglycosylase H333A Mutant Apo Structure To Be Published.
Page generated: Mon Oct 28 22:40:50 2024

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