Zinc in PDB 6h5k: Mamm Ctd D249E - Zinc Form

The structure of Mamm Ctd D249E - Zinc Form, PDB code: 6h5k was solved by S.Barber-Zucker, R.Zarivach, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.03 / 1.54
Space group	P 31 2 1
Cell size a, b, c (Å), α, β, γ (°)	53.151, 53.151, 63.862, 90.00, 90.00, 120.00
R / Rfree (%)	14.8 / 18.6

The binding sites of Zinc atom in the Mamm Ctd D249E - Zinc Form (pdb code 6h5k). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 3 binding sites of Zinc where determined in the Mamm Ctd D249E - Zinc Form, PDB code: 6h5k:
Jump to Zinc binding site number: 1; 2; 3;

Zinc binding site 1 out of 3 in the Mamm Ctd D249E - Zinc Form


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Mamm Ctd D249E - Zinc Form within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:11.6 occ:1.00 OE1 A:GLU289 2.0 12.1 1.0 NE2 A:HIS236 2.0 10.8 1.0 CD A:GLU289 2.7 11.8 1.0 OE2 A:GLU289 2.9 13.0 1.0 CD2 A:HIS236 3.0 10.5 1.0 CE1 A:HIS236 3.1 12.6 1.0 CG A:HIS236 4.2 10.2 1.0 ND1 A:HIS236 4.2 12.8 1.0 CG A:GLU289 4.2 11.2 1.0 CG2 A:ILE235 4.2 11.9 1.0 CD1 A:ILE251 4.9 12.9 1.0 O A:HOH570 4.9 28.8 1.0 CB A:GLU289 4.9 11.7 1.0

Zinc binding site 2 out of 3 in the Mamm Ctd D249E - Zinc Form


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Mamm Ctd D249E - Zinc Form within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn402 b:13.6 occ:0.50 NE2 A:HIS264 2.0 18.3 1.0 OE2 A:GLU268 2.1 24.4 1.0 CD2 A:HIS264 2.9 18.0 1.0 CD A:GLU268 3.0 21.2 1.0 CE1 A:HIS264 3.1 17.4 1.0 CG A:GLU268 3.3 17.5 1.0 CG A:HIS264 4.1 16.2 1.0 ND1 A:HIS264 4.1 16.2 1.0 OE1 A:GLU268 4.2 28.7 1.0 O A:HOH557 4.8 23.4 1.0 CB A:GLU268 4.8 15.0 1.0

Zinc binding site 3 out of 3 in the Mamm Ctd D249E - Zinc Form


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Mamm Ctd D249E - Zinc Form within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn403 b:7.5 occ:0.50 O A:HOH511 2.0 15.0 1.0 ND1 A:HIS264 2.1 16.2 1.0 O A:HOH556 2.2 18.2 1.0 SG A:CYS267 2.4 16.9 1.0 CE1 A:HIS264 3.0 17.4 1.0 CB A:CYS267 3.1 12.6 1.0 CG A:HIS264 3.1 16.2 1.0 CA A:HIS264 3.4 12.7 1.0 CB A:HIS264 3.5 14.0 1.0 O A:HOH531 3.9 19.6 1.0 O A:VAL286 3.9 12.1 1.0 CA A:SER287 4.2 9.7 1.0 NE2 A:HIS264 4.2 18.3 1.0 CD2 A:HIS264 4.2 18.0 1.0 N A:HIS264 4.3 12.4 1.0 O A:HIS264 4.3 13.3 1.0 C A:HIS264 4.4 12.5 1.0 CA A:CYS267 4.5 11.5 1.0 CB A:SER287 4.6 11.1 1.0 O A:ALA263 4.6 13.8 1.0 C A:ALA263 4.8 13.3 1.0 C A:VAL286 4.8 9.8 1.0 N A:ALA288 4.9 10.5 1.0 C A:SER287 4.9 10.0 1.0 N A:SER287 4.9 9.7 1.0 N A:CYS267 4.9 11.1 1.0 O A:HOH558 4.9 29.6 1.0

S.Barber-Zucker, R.Zarivach. Mamm Ctd D249E - Zinc Form To Be Published.