Zinc in PDB 6chg: Crystal Structure of the Yeast Compass Catalytic Module

All present enzymatic activity of Crystal Structure of the Yeast Compass Catalytic Module:
2.1.1.43;

The structure of Crystal Structure of the Yeast Compass Catalytic Module, PDB code: 6chg was solved by P.L.Hsu, H.Li, N.Zheng, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	44.61 / 2.99
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	163.839, 138.319, 136.133, 90.00, 112.41, 90.00
R / Rfree (%)	22.8 / 27.1

The binding sites of Zinc atom in the Crystal Structure of the Yeast Compass Catalytic Module (pdb code 6chg). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of the Yeast Compass Catalytic Module, PDB code: 6chg:

Zinc binding site 1 out of 1 in the Crystal Structure of the Yeast Compass Catalytic Module


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the Yeast Compass Catalytic Module within 5.0Å range: probe atom residue distance (Å) B Occ C:Zn1102 b:0.5 occ:0.41 SG C:CYS988 2.1 0.1 1.0 SG C:CYS990 2.4 0.4 1.0 SG C:CYS939 2.6 0.9 1.0 O C:LYS996 2.8 0.1 1.0 HB2 C:CYS995 2.9 0.7 1.0 HB3 C:CYS990 3.1 0.8 1.0 HG C:CYS995 3.4 0.8 1.0 CB C:CYS990 3.4 0.3 1.0 H C:CYS939 3.6 0.6 1.0 SG C:CYS995 3.6 0.7 1.0 CB C:CYS995 3.6 0.8 1.0 CB C:CYS988 3.8 0.7 1.0 HA C:CYS938 3.8 0.6 1.0 HE2 C:HIS937 3.9 0.3 1.0 C C:LYS996 3.9 0.8 1.0 HB2 C:CYS990 3.9 0.8 1.0 HB3 C:CYS988 4.0 0.5 1.0 H C:LYS996 4.0 0.1 1.0 HB2 C:CYS988 4.1 0.5 1.0 N C:CYS939 4.1 0.2 1.0 HB2 C:LYS996 4.2 0.5 1.0 N C:LYS996 4.2 0.4 1.0 CB C:CYS939 4.2 0.6 1.0 NE2 C:HIS937 4.2 0.2 1.0 HB3 C:CYS995 4.3 0.7 1.0 HB2 C:CYS939 4.3 0.7 1.0 H C:CYS990 4.5 0.1 1.0 N C:CYS990 4.5 0.4 1.0 CA C:LYS996 4.5 0.7 1.0 HA2 C:GLY997 4.5 0.6 1.0 C C:CYS995 4.6 0.3 1.0 CA C:CYS990 4.6 0.9 1.0 CA C:CYS995 4.6 0.2 1.0 CD2 C:HIS937 4.7 0.7 1.0 HD2 C:HIS937 4.7 0.3 1.0 CA C:CYS938 4.7 0.5 1.0 HA C:CYS995 4.7 0.2 1.0 HB3 C:ALA992 4.8 0.3 1.0 C C:CYS938 4.8 0.5 1.0 CA C:CYS939 4.8 0.2 1.0 CB C:LYS996 4.9 0.4 1.0 HB3 C:CYS939 4.9 0.7 1.0 CA C:CYS988 4.9 0.7 1.0 N C:GLY997 4.9 0.2 1.0 CE1 C:HIS937 4.9 0.6 1.0

P.L.Hsu, H.Li, H.T.Lau, C.Leonen, A.Dhall, S.E.Ong, C.Chatterjee, N.Zheng. Crystal Structure of the Compass H3K4 Methyltransferase Catalytic Module. Cell V. 174 1106 2018.
ISSN: ISSN 1097-4172
PubMed: 30100181
DOI: 10.1016/J.CELL.2018.06.038