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Zinc in PDB 5znf: Alternating Zinc Fingers in the Human Male Associated Protein Zfy: 2D uc(Nmr) Structure of An Even Finger and Implications For "Jumping-Linker" Dna Recognition

Zinc Binding Sites:

The binding sites of Zinc atom in the Alternating Zinc Fingers in the Human Male Associated Protein Zfy: 2D uc(Nmr) Structure of An Even Finger and Implications For "Jumping-Linker" Dna Recognition (pdb code 5znf). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Alternating Zinc Fingers in the Human Male Associated Protein Zfy: 2D uc(Nmr) Structure of An Even Finger and Implications For "Jumping-Linker" Dna Recognition, PDB code: 5znf:

Zinc binding site 1 out of 1 in 5znf

Go back to Zinc Binding Sites List in 5znf
Zinc binding site 1 out of 1 in the Alternating Zinc Fingers in the Human Male Associated Protein Zfy: 2D uc(Nmr) Structure of An Even Finger and Implications For "Jumping-Linker" Dna Recognition


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Alternating Zinc Fingers in the Human Male Associated Protein Zfy: 2D uc(Nmr) Structure of An Even Finger and Implications For "Jumping-Linker" Dna Recognition within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn31

b:0.0
occ:1.00
NE2 A:HIS21 2.0 0.0 1.0
NE2 A:HIS26 2.0 0.0 1.0
SG A:CYS8 2.3 0.0 1.0
SG A:CYS5 2.3 0.0 1.0
CD2 A:HIS26 2.9 0.0 1.0
CD2 A:HIS21 2.9 0.0 1.0
CE1 A:HIS21 3.0 0.0 1.0
CE1 A:HIS26 3.0 0.0 1.0
HD2 A:HIS26 3.1 0.0 1.0
HD2 A:HIS21 3.2 0.0 1.0
H A:CYS8 3.2 0.0 1.0
HE1 A:HIS21 3.2 0.0 1.0
HB2 A:TYR7 3.2 0.0 1.0
HE1 A:HIS26 3.3 0.0 1.0
HB3 A:CYS8 3.3 0.0 1.0
HB3 A:TYR10 3.4 0.0 1.0
HB3 A:CYS5 3.4 0.0 1.0
CB A:CYS8 3.4 0.0 1.0
CB A:CYS5 3.5 0.0 1.0
HG13 A:ILE22 3.5 0.0 1.0
HB2 A:CYS5 3.7 0.0 1.0
H A:TYR10 3.8 0.0 1.0
N A:CYS8 3.9 0.0 1.0
ND1 A:HIS21 4.1 0.0 1.0
HD2 A:TYR7 4.1 0.0 1.0
ND1 A:HIS26 4.1 0.0 1.0
CG A:HIS26 4.1 0.0 1.0
CG A:HIS21 4.1 0.0 1.0
CA A:CYS8 4.2 0.0 1.0
HB2 A:LYS25 4.2 0.0 1.0
HA A:ILE22 4.3 0.0 1.0
CB A:TYR7 4.3 0.0 1.0
HB2 A:CYS8 4.3 0.0 1.0
HB3 A:LYS25 4.3 0.0 1.0
CB A:TYR10 4.4 0.0 1.0
H A:TYR7 4.5 0.0 1.0
HB3 A:TYR7 4.5 0.0 1.0
C A:CYS8 4.6 0.0 1.0
HD2 A:TYR10 4.6 0.0 1.0
HB2 A:TYR10 4.6 0.0 1.0
CG1 A:ILE22 4.6 0.0 1.0
N A:TYR10 4.7 0.0 1.0
H A:GLU9 4.7 0.0 1.0
HD13 A:ILE22 4.7 0.0 1.0
CB A:LYS25 4.8 0.0 1.0
N A:GLU9 4.8 0.0 1.0
HG3 A:LYS25 4.8 0.0 1.0
HD12 A:ILE22 4.8 0.0 1.0
HZ2 A:LYS25 4.8 0.0 1.0
C A:TYR7 4.9 0.0 1.0
CA A:CYS5 4.9 0.0 1.0
CD2 A:TYR7 5.0 0.0 1.0
HD1 A:HIS21 5.0 0.0 1.0
CD1 A:ILE22 5.0 0.0 1.0
HD1 A:HIS26 5.0 0.0 1.0

Reference:

M.Kochoyan, T.F.Havel, D.T.Nguyen, C.E.Dahl, H.T.Keutmann, M.A.Weiss. Alternating Zinc Fingers in the Human Male Associated Protein Zfy: 2D uc(Nmr) Structure of An Even Finger and Implications For "Jumping-Linker" Dna Recognition. Biochemistry V. 30 3371 1991.
ISSN: ISSN 0006-2960
PubMed: 1849423
DOI: 10.1021/BI00228A004
Page generated: Wed Dec 16 11:27:19 2020

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