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Zinc in PDB 5t53: Molecular Basis For Cohesin Acetylation By Establishment of Sister Chromatid Cohesion N-Acetyltransferase ESCO1

Protein crystallography data

The structure of Molecular Basis For Cohesin Acetylation By Establishment of Sister Chromatid Cohesion N-Acetyltransferase ESCO1, PDB code: 5t53 was solved by R.Marmorstein, Y.Rivera-Colon, G.P.Liszczak, A.S.Olia, A.Maguire, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.86 / 2.70
Space group I 41
Cell size a, b, c (Å), α, β, γ (°) 115.556, 115.556, 61.152, 90.00, 90.00, 90.00
R / Rfree (%) 25 / 28.5

Zinc Binding Sites:

The binding sites of Zinc atom in the Molecular Basis For Cohesin Acetylation By Establishment of Sister Chromatid Cohesion N-Acetyltransferase ESCO1 (pdb code 5t53). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Molecular Basis For Cohesin Acetylation By Establishment of Sister Chromatid Cohesion N-Acetyltransferase ESCO1, PDB code: 5t53:

Zinc binding site 1 out of 1 in 5t53

Go back to Zinc Binding Sites List in 5t53
Zinc binding site 1 out of 1 in the Molecular Basis For Cohesin Acetylation By Establishment of Sister Chromatid Cohesion N-Acetyltransferase ESCO1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Molecular Basis For Cohesin Acetylation By Establishment of Sister Chromatid Cohesion N-Acetyltransferase ESCO1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn902

b:0.6
occ:1.00
NE2 A:HIS637 1.9 95.8 1.0
ND1 A:HIS641 2.0 95.4 1.0
SG A:CYS619 2.3 96.8 1.0
CE1 A:HIS641 2.5 94.3 1.0
CB A:CYS622 2.6 83.9 1.0
CE1 A:HIS637 2.7 91.3 1.0
CB A:CYS619 2.8 80.6 1.0
CD2 A:HIS637 3.0 99.9 1.0
SG A:CYS622 3.2 0.6 1.0
CG A:HIS641 3.3 92.2 1.0
NE2 A:HIS641 3.8 78.1 1.0
CA A:CYS622 3.8 90.1 1.0
ND1 A:HIS637 3.8 91.6 1.0
N A:CYS622 3.9 99.0 1.0
CG A:HIS637 4.0 99.4 1.0
CB A:HIS641 4.0 97.4 1.0
CD2 A:HIS641 4.2 86.8 1.0
CA A:CYS619 4.3 93.8 1.0
C A:CYS622 4.7 0.9 1.0
CA A:HIS641 4.8 82.2 1.0
CG1 A:VAL621 4.8 91.7 1.0
N A:GLY623 4.9 90.1 1.0
CE1 A:TYR626 5.0 0.8 1.0
C A:CYS619 5.0 97.3 1.0
C A:VAL621 5.0 94.3 1.0

Reference:

Y.Rivera-Colon, A.Maguire, G.P.Liszczak, A.S.Olia, R.Marmorstein. Molecular Basis For Cohesin Acetylation By Establishment of Sister Chromatid Cohesion N-Acetyltransferase ESCO1. J. Biol. Chem. V. 291 26468 2016.
ISSN: ESSN 1083-351X
PubMed: 27803161
DOI: 10.1074/JBC.M116.752220
Page generated: Mon Oct 28 08:14:28 2024

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