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Zinc in PDB 5mw9: Complex Between the Leucine Zipper (Lz) and Centrosomin-Motif 2 (CM2) Domains of Drosophila Melanogaster Centrosomin (Cnn) - L535E Mutant Form

Protein crystallography data

The structure of Complex Between the Leucine Zipper (Lz) and Centrosomin-Motif 2 (CM2) Domains of Drosophila Melanogaster Centrosomin (Cnn) - L535E Mutant Form, PDB code: 5mw9 was solved by Z.Feng, S.Johnson, J.W.Raff, S.M.Lea, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.35 / 2.20
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 275.792, 43.000, 48.350, 90.00, 96.57, 90.00
R / Rfree (%) 25.8 / 30.2

Zinc Binding Sites:

The binding sites of Zinc atom in the Complex Between the Leucine Zipper (Lz) and Centrosomin-Motif 2 (CM2) Domains of Drosophila Melanogaster Centrosomin (Cnn) - L535E Mutant Form (pdb code 5mw9). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Complex Between the Leucine Zipper (Lz) and Centrosomin-Motif 2 (CM2) Domains of Drosophila Melanogaster Centrosomin (Cnn) - L535E Mutant Form, PDB code: 5mw9:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 5mw9

Go back to Zinc Binding Sites List in 5mw9
Zinc binding site 1 out of 2 in the Complex Between the Leucine Zipper (Lz) and Centrosomin-Motif 2 (CM2) Domains of Drosophila Melanogaster Centrosomin (Cnn) - L535E Mutant Form


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Complex Between the Leucine Zipper (Lz) and Centrosomin-Motif 2 (CM2) Domains of Drosophila Melanogaster Centrosomin (Cnn) - L535E Mutant Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1201

b:67.1
occ:1.00
NE2 B:HIS1082 2.0 58.2 1.0
NE2 A:HIS1082 2.1 62.9 1.0
SG B:CYS1084 2.3 68.8 1.0
SG A:CYS1084 2.3 72.5 1.0
CE1 A:HIS1082 2.8 60.0 1.0
CE1 B:HIS1082 2.9 53.2 1.0
CD2 B:HIS1082 3.1 61.3 1.0
CB B:CYS1084 3.1 57.8 1.0
CB A:CYS1084 3.2 65.4 1.0
CD2 A:HIS1082 3.3 66.4 1.0
CA B:CYS1084 3.7 57.6 1.0
CA A:CYS1084 3.7 59.6 1.0
ND1 A:HIS1082 4.0 58.3 1.0
ND1 B:HIS1082 4.0 53.1 1.0
CG B:HIS1082 4.2 54.1 1.0
CG A:HIS1082 4.3 61.5 1.0
N A:CYS1084 4.3 56.8 1.0
N B:CYS1084 4.4 54.2 1.0
C B:CYS1084 4.9 59.1 1.0
O B:HOH1208 4.9 61.8 1.0
C A:CYS1084 5.0 58.0 1.0

Zinc binding site 2 out of 2 in 5mw9

Go back to Zinc Binding Sites List in 5mw9
Zinc binding site 2 out of 2 in the Complex Between the Leucine Zipper (Lz) and Centrosomin-Motif 2 (CM2) Domains of Drosophila Melanogaster Centrosomin (Cnn) - L535E Mutant Form


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Complex Between the Leucine Zipper (Lz) and Centrosomin-Motif 2 (CM2) Domains of Drosophila Melanogaster Centrosomin (Cnn) - L535E Mutant Form within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Zn1201

b:0.5
occ:1.00
NE2 E:HIS1082 2.0 0.2 1.0
NE2 F:HIS1082 2.0 1.0 1.0
SG F:CYS1084 2.3 0.2 1.0
SG E:CYS1084 2.3 0.9 1.0
CE1 E:HIS1082 2.4 0.3 1.0
CE1 F:HIS1082 2.4 0.9 1.0
CB E:CYS1084 3.0 0.6 1.0
CD2 F:HIS1082 3.3 0.9 1.0
CD2 E:HIS1082 3.4 0.1 1.0
CA E:CYS1084 3.5 0.0 1.0
CB F:CYS1084 3.5 0.3 1.0
ND1 E:HIS1082 3.7 0.3 1.0
ND1 F:HIS1082 3.7 0.3 1.0
CG F:HIS1082 4.2 1.0 1.0
CG E:HIS1082 4.2 0.4 1.0
CA F:CYS1084 4.2 0.1 1.0
N E:CYS1084 4.3 0.9 1.0
C E:CYS1084 4.7 0.4 1.0
O E:CYS1084 4.8 0.8 1.0
N F:CYS1084 4.9 0.6 1.0

Reference:

Z.Feng, A.Caballe, A.Wainman, S.Johnson, A.F.M.Haensele, M.A.Cottee, P.T.Conduit, S.M.Lea, J.W.Raff. Structural Basis For Mitotic Centrosome Assembly in Flies. Cell V. 169 1078 2017.
ISSN: ISSN 1097-4172
PubMed: 28575671
DOI: 10.1016/J.CELL.2017.05.030
Page generated: Sun Oct 27 22:22:50 2024

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