Zinc in PDB 5muq: Crystal Structure of DC8E8 Fab at pH 7.0 Containing A Zn Atom

The structure of Crystal Structure of DC8E8 Fab at pH 7.0 Containing A Zn Atom, PDB code: 5muq was solved by R.Skrabana, M.Novak, O.Cehlar, E.Kontsekova, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	98.30 / 2.62
Space group	P 31
Cell size a, b, c (Å), α, β, γ (°)	113.510, 113.510, 69.390, 90.00, 90.00, 120.00
R / Rfree (%)	21.2 / 27.9

The binding sites of Zinc atom in the Crystal Structure of DC8E8 Fab at pH 7.0 Containing A Zn Atom (pdb code 5muq). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of DC8E8 Fab at pH 7.0 Containing A Zn Atom, PDB code: 5muq:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Crystal Structure of DC8E8 Fab at pH 7.0 Containing A Zn Atom


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of DC8E8 Fab at pH 7.0 Containing A Zn Atom within 5.0Å range: probe atom residue distance (Å) B Occ L:Zn301 b:76.7 occ:1.00 NE2 L:HIS194 1.6 63.4 1.0 OE1 L:GLU190 1.8 86.5 1.0 CE1 L:HIS194 2.3 70.8 1.0 CD L:GLU190 2.5 92.3 1.0 N1 L:IMD302 2.7 0.4 1.0 OE2 L:GLU190 2.8 92.0 1.0 CD2 L:HIS194 2.8 73.2 1.0 C2 L:IMD302 3.3 0.5 1.0 ND1 L:HIS194 3.5 60.1 1.0 CG L:HIS194 3.7 62.9 1.0 NH2 L:ARG160 3.7 89.3 1.0 C5 L:IMD302 3.8 0.5 1.0 CG L:GLU190 3.9 0.2 1.0 N3 L:IMD302 4.5 0.2 1.0 C4 L:IMD302 4.7 0.5 1.0 O L:GLU190 4.7 99.9 1.0 CB L:ARG193 4.8 0.9 1.0 CB L:GLU190 4.9 0.2 1.0 CA L:GLU190 4.9 0.5 1.0

Zinc binding site 2 out of 2 in the Crystal Structure of DC8E8 Fab at pH 7.0 Containing A Zn Atom


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of DC8E8 Fab at pH 7.0 Containing A Zn Atom within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn301 b:73.1 occ:1.00 NE2 B:HIS194 1.6 55.2 1.0 OE1 B:GLU190 1.8 76.7 1.0 CE1 B:HIS194 2.3 59.1 1.0 CD B:GLU190 2.5 87.4 1.0 OE2 B:GLU190 2.6 89.4 1.0 CD2 B:HIS194 2.8 71.7 1.0 C5 B:IMD302 2.9 0.4 1.0 N1 B:IMD302 3.2 0.2 1.0 ND1 B:HIS194 3.5 52.9 1.0 CG B:HIS194 3.7 62.3 1.0 C4 B:IMD302 3.7 0.0 1.0 NH2 B:ARG160 3.8 94.8 1.0 CG B:GLU190 3.9 0.2 1.0 C2 B:IMD302 4.2 0.2 1.0 N3 B:IMD302 4.4 0.9 1.0 O B:GLU190 4.7 87.4 1.0 CB B:ARG193 4.7 97.9 1.0 CA B:GLU190 4.9 0.8 1.0 CB B:GLU190 4.9 0.0 1.0 CD B:ARG193 4.9 98.5 1.0

R.Skrabana, M.Novak, O.Cehlar, E.Kontsekova. Crystal Structure of DC8E8 Fab at pH 7.0 Containing A Zn Atom To Be Published.