Zinc in PDB 5kn5: Tgfalpha/Epiregulin Complex with Neutralizing Antibody LY3016859

The structure of Tgfalpha/Epiregulin Complex with Neutralizing Antibody LY3016859, PDB code: 5kn5 was solved by S.Atwell, J.S.Boyles, D.K.Clawson, Z.Druzina, G.H.Josef, K.Weichert, D.R.Witcher, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	25.00 / 2.80
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	63.249, 164.346, 64.972, 90.00, 104.21, 90.00
R / Rfree (%)	20.6 / 26.3

The binding sites of Zinc atom in the Tgfalpha/Epiregulin Complex with Neutralizing Antibody LY3016859 (pdb code 5kn5). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Tgfalpha/Epiregulin Complex with Neutralizing Antibody LY3016859, PDB code: 5kn5:

Zinc binding site 1 out of 1 in the Tgfalpha/Epiregulin Complex with Neutralizing Antibody LY3016859


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Tgfalpha/Epiregulin Complex with Neutralizing Antibody LY3016859 within 5.0Å range: probe atom residue distance (Å) B Occ C:Zn101 b:37.2 occ:1.00 NE2 C:HIS35 1.9 37.5 1.0 ND1 F:HIS18 2.0 43.3 1.0 ND1 C:HIS18 2.0 40.8 1.0 NE2 F:HIS35 2.2 35.8 1.0 CE1 C:HIS35 2.6 37.2 1.0 CG F:HIS18 2.9 40.6 1.0 CE1 C:HIS18 3.0 40.3 1.0 CG C:HIS18 3.0 38.6 1.0 CE1 F:HIS18 3.1 42.7 1.0 CB F:HIS18 3.1 35.9 1.0 CE1 F:HIS35 3.2 35.3 1.0 CD2 C:HIS35 3.2 37.8 1.0 CD2 F:HIS35 3.2 36.3 1.0 CB C:HIS18 3.4 35.1 1.0 CA F:HIS18 3.6 34.0 1.0 CA C:HIS18 3.8 34.3 1.0 ND1 C:HIS35 3.9 38.3 1.0 CD2 F:HIS18 4.1 42.8 1.0 CG C:HIS35 4.1 37.5 1.0 NE2 C:HIS18 4.1 40.3 1.0 NE2 F:HIS18 4.1 42.8 1.0 CD2 C:HIS18 4.2 40.4 1.0 CE1 C:TYR38 4.2 38.2 1.0 CE1 F:TYR38 4.2 48.1 1.0 ND1 F:HIS35 4.3 36.1 1.0 CG F:HIS35 4.3 35.6 1.0 C F:HIS18 4.4 32.8 1.0 CD1 C:TYR38 4.5 39.6 1.0 CD1 F:TYR38 4.5 48.8 1.0 C C:HIS18 4.6 32.1 1.0 CZ C:TYR38 4.6 43.0 1.0 CZ F:TYR38 4.7 54.6 1.0 N F:HIS18 4.7 33.8 1.0 O F:HIS18 4.8 28.8 1.0 N C:HIS18 4.9 36.4 1.0 O C:HIS18 4.9 28.4 1.0 OH C:TYR38 4.9 41.0 1.0 O F:PHE17 4.9 36.5 1.0

J.S.Boyles, S.Atwell, Z.Druzina, J.G.Heuer, D.R.Witcher. Structural Basis of Selectivity and Neutralizing Activity of A Tgf Alpha /Epiregulin Specific Antibody. Protein Sci. V. 25 2028 2016.
ISSN: ESSN 1469-896X
PubMed: 27543934
DOI: 10.1002/PRO.3023