Zinc in PDB 5i7c: Centrosomin-Motif 2 (CM2) Domain of Drosophila Melanogaster Centrosomin (Cnn)

The structure of Centrosomin-Motif 2 (CM2) Domain of Drosophila Melanogaster Centrosomin (Cnn), PDB code: 5i7c was solved by Z.Feng, M.A.Cottee, S.Johnson, S.M.Lea, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	42.63 / 2.80
Space group	P 61
Cell size a, b, c (Å), α, β, γ (°)	49.220, 49.220, 211.230, 90.00, 90.00, 120.00
R / Rfree (%)	24.3 / 26.8

The binding sites of Zinc atom in the Centrosomin-Motif 2 (CM2) Domain of Drosophila Melanogaster Centrosomin (Cnn) (pdb code 5i7c). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Centrosomin-Motif 2 (CM2) Domain of Drosophila Melanogaster Centrosomin (Cnn), PDB code: 5i7c:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Centrosomin-Motif 2 (CM2) Domain of Drosophila Melanogaster Centrosomin (Cnn)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Centrosomin-Motif 2 (CM2) Domain of Drosophila Melanogaster Centrosomin (Cnn) within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn1201 b:0.6 occ:1.00 NE2 B:HIS1082 2.1 0.4 1.0 NE2 A:HIS1082 2.1 0.5 1.0 SG A:CYS1084 2.3 0.8 1.0 SG B:CYS1084 2.3 0.1 1.0 CD2 A:HIS1082 2.5 0.2 1.0 CD2 B:HIS1082 3.0 0.5 1.0 CE1 B:HIS1082 3.1 0.7 1.0 CB A:CYS1084 3.3 0.6 1.0 CE1 A:HIS1082 3.3 0.2 1.0 CB B:CYS1084 3.6 0.6 1.0 CA A:CYS1084 3.6 0.2 1.0 CG A:HIS1082 3.8 0.4 1.0 CA B:CYS1084 4.0 0.8 1.0 ND1 A:HIS1082 4.1 0.1 1.0 ND1 B:HIS1082 4.2 0.3 1.0 CG B:HIS1082 4.2 0.6 1.0 N A:CYS1084 4.3 0.4 1.0 CG1 A:VAL1087 4.5 0.6 1.0 N B:CYS1084 4.6 0.6 1.0 CG1 B:VAL1087 4.8 0.8 1.0 C A:CYS1084 4.9 0.3 1.0 C A:ASP1083 5.0 1.0 1.0

Zinc binding site 2 out of 2 in the Centrosomin-Motif 2 (CM2) Domain of Drosophila Melanogaster Centrosomin (Cnn)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Centrosomin-Motif 2 (CM2) Domain of Drosophila Melanogaster Centrosomin (Cnn) within 5.0Å range: probe atom residue distance (Å) B Occ C:Zn1201 b:0.2 occ:1.00 NE2 D:HIS1082 2.1 0.3 1.0 NE2 C:HIS1082 2.1 0.5 1.0 SG C:CYS1084 2.3 0.4 1.0 SG D:CYS1084 2.3 0.6 1.0 CD2 C:HIS1082 2.4 0.3 1.0 CD2 D:HIS1082 2.5 0.7 1.0 CE1 D:HIS1082 3.3 0.2 1.0 CE1 C:HIS1082 3.3 0.5 1.0 CB C:CYS1084 3.4 0.5 1.0 CB D:CYS1084 3.4 90.2 1.0 CA C:CYS1084 3.6 0.8 1.0 CG C:HIS1082 3.7 0.0 1.0 CA D:CYS1084 3.7 87.9 1.0 CG D:HIS1082 3.7 0.9 1.0 ND1 C:HIS1082 4.1 0.1 1.0 ND1 D:HIS1082 4.1 0.0 1.0 N C:CYS1084 4.3 0.2 1.0 N D:CYS1084 4.3 89.7 1.0 CG1 D:VAL1087 4.6 0.9 1.0 CB C:HIS1082 4.9 0.4 1.0 C C:CYS1084 4.9 0.3 1.0 C C:ASP1083 4.9 1.0 1.0 C D:ASP1083 4.9 0.9 1.0 C D:CYS1084 5.0 98.3 1.0 CB D:HIS1082 5.0 0.9 1.0

Z.Feng, A.Caballe, A.Wainman, S.Johnson, A.F.M.Haensele, M.A.Cottee, P.T.Conduit, S.M.Lea, J.W.Raff. Structural Basis For Mitotic Centrosome Assembly in Flies. Cell V. 169 1078 2017.
ISSN: ISSN 1097-4172
PubMed: 28575671
DOI: 10.1016/J.CELL.2017.05.030