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Zinc in PDB 4zk0: Psoriasis Pathogenesis - Pso P27 Constitute A Compact Structure Forming Large Aggregates. High pH Structure

Protein crystallography data

The structure of Psoriasis Pathogenesis - Pso P27 Constitute A Compact Structure Forming Large Aggregates. High pH Structure, PDB code: 4zk0 was solved by R.Helland, H.Lysvand, G.Slupphaug, O.J.Iversen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 57.36 / 2.15
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 50.808, 68.273, 105.773, 90.00, 90.00, 90.00
R / Rfree (%) 17.4 / 23.4

Zinc Binding Sites:

The binding sites of Zinc atom in the Psoriasis Pathogenesis - Pso P27 Constitute A Compact Structure Forming Large Aggregates. High pH Structure (pdb code 4zk0). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Psoriasis Pathogenesis - Pso P27 Constitute A Compact Structure Forming Large Aggregates. High pH Structure, PDB code: 4zk0:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 4zk0

Go back to Zinc Binding Sites List in 4zk0
Zinc binding site 1 out of 2 in the Psoriasis Pathogenesis - Pso P27 Constitute A Compact Structure Forming Large Aggregates. High pH Structure


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Psoriasis Pathogenesis - Pso P27 Constitute A Compact Structure Forming Large Aggregates. High pH Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:35.5
occ:1.00
NE2 A:HIS283 2.1 26.9 1.0
OD1 A:ASP281 2.2 34.2 1.0
O A:HOH580 2.3 34.7 1.0
OD2 A:ASP281 2.5 30.0 1.0
CG A:ASP281 2.7 31.4 1.0
CD2 A:HIS283 3.0 24.7 1.0
CE1 A:HIS283 3.2 28.2 1.0
CB A:ASP281 4.2 30.7 1.0
CG A:HIS283 4.2 27.1 1.0
ND1 A:HIS283 4.3 28.3 1.0
CD A:ARG214 4.3 43.4 1.0
CB A:ARG214 4.4 32.3 1.0
CG A:ARG214 4.6 40.1 1.0
NE2 A:HIS364 4.6 33.6 1.0
CA A:ASP281 4.9 31.0 1.0

Zinc binding site 2 out of 2 in 4zk0

Go back to Zinc Binding Sites List in 4zk0
Zinc binding site 2 out of 2 in the Psoriasis Pathogenesis - Pso P27 Constitute A Compact Structure Forming Large Aggregates. High pH Structure


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Psoriasis Pathogenesis - Pso P27 Constitute A Compact Structure Forming Large Aggregates. High pH Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn402

b:41.5
occ:0.50
OE2 A:GLU277 1.8 71.6 1.0
NE2 A:HIS220 2.1 43.4 1.0
CD A:GLU277 2.9 67.6 1.0
CE1 A:HIS220 2.9 46.9 1.0
CD2 A:HIS220 3.1 42.5 1.0
CG A:GLU277 3.6 57.0 1.0
OE1 A:GLU277 3.8 73.3 1.0
ND1 A:HIS220 4.0 46.5 1.0
CG A:HIS220 4.2 41.3 1.0

Reference:

H.Lysvand, R.Helland, L.Hagen, G.Slupphaug, O.J.Iversen. Psoriasis Pathogenesis - Pso P27 Constitutes A Compact Structure Forming Large Aggregates. Biochem Biophys Rep V. 2 132 2015.
ISSN: ESSN 2405-5808
PubMed: 29124154
DOI: 10.1016/J.BBREP.2015.06.001
Page generated: Sun Oct 27 11:47:53 2024

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