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Zinc in PDB 4x3o: SIRT2 in Complex with A Myristoyl Peptide

Protein crystallography data

The structure of SIRT2 in Complex with A Myristoyl Peptide, PDB code: 4x3o was solved by Y.Wang, W.Z.Zhang, Q.Hao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.50
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 37.433, 77.594, 56.249, 90.00, 97.22, 90.00
R / Rfree (%) 12.1 / 15.7

Zinc Binding Sites:

The binding sites of Zinc atom in the SIRT2 in Complex with A Myristoyl Peptide (pdb code 4x3o). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the SIRT2 in Complex with A Myristoyl Peptide, PDB code: 4x3o:

Zinc binding site 1 out of 1 in 4x3o

Go back to Zinc Binding Sites List in 4x3o
Zinc binding site 1 out of 1 in the SIRT2 in Complex with A Myristoyl Peptide


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of SIRT2 in Complex with A Myristoyl Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:12.5
occ:1.00
SG A:CYS200 2.3 15.6 1.0
SG A:CYS195 2.3 12.8 1.0
SG A:CYS224 2.3 12.1 1.0
SG A:CYS221 2.3 14.0 1.0
CB A:CYS200 3.1 16.3 1.0
CB A:CYS221 3.1 11.8 1.0
CB A:CYS195 3.2 11.5 1.0
CB A:CYS224 3.5 12.1 1.0
N A:CYS224 3.8 13.4 1.0
CA A:CYS224 4.2 12.6 1.0
O A:HOH769 4.5 24.6 1.0
CA A:CYS200 4.5 16.6 1.0
CB A:HIS202 4.5 16.1 0.6
CA A:CYS195 4.6 10.2 1.0
CA A:CYS221 4.6 11.9 1.0
N A:ARG201 4.6 14.1 1.0
N A:HIS202 4.6 13.7 0.6
CB A:ASP223 4.7 18.2 1.0
N A:HIS202 4.7 13.8 0.4
C A:ASP223 4.7 14.0 1.0
CB A:SER226 4.7 11.0 1.0
C A:CYS224 4.8 11.3 1.0
CB A:SER197 4.8 15.7 0.7
C A:CYS200 4.9 16.8 1.0
OG A:SER226 4.9 13.7 1.0
CB A:HIS202 4.9 15.2 0.4
CB A:SER197 4.9 15.1 0.3
N A:GLN225 4.9 11.4 1.0
N A:SER226 5.0 10.3 1.0

Reference:

Y.Wang, W.Z.Zhang, Q.Hao. SIRT2 in Complex with A Myristoyl Peptide To Be Published.
Page generated: Wed Dec 16 05:52:45 2020

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