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Zinc in PDB 4x29: Structural Basis For the Enhancement of Virulence By Entomopoxvirus Fusolin and Its in Vivo Crystallization Into Viral Spindles (Complex with Zinc)

Protein crystallography data

The structure of Structural Basis For the Enhancement of Virulence By Entomopoxvirus Fusolin and Its in Vivo Crystallization Into Viral Spindles (Complex with Zinc), PDB code: 4x29 was solved by K.Aizel, M.Boudes, F.Coulibaly, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.31 / 2.41
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 71.790, 71.790, 129.590, 90.00, 90.00, 90.00
R / Rfree (%) 15.6 / 22.3

Zinc Binding Sites:

The binding sites of Zinc atom in the Structural Basis For the Enhancement of Virulence By Entomopoxvirus Fusolin and Its in Vivo Crystallization Into Viral Spindles (Complex with Zinc) (pdb code 4x29). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Structural Basis For the Enhancement of Virulence By Entomopoxvirus Fusolin and Its in Vivo Crystallization Into Viral Spindles (Complex with Zinc), PDB code: 4x29:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 4x29

Go back to Zinc Binding Sites List in 4x29
Zinc binding site 1 out of 2 in the Structural Basis For the Enhancement of Virulence By Entomopoxvirus Fusolin and Its in Vivo Crystallization Into Viral Spindles (Complex with Zinc)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structural Basis For the Enhancement of Virulence By Entomopoxvirus Fusolin and Its in Vivo Crystallization Into Viral Spindles (Complex with Zinc) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:11.4
occ:0.85
NE2 A:HIS144 1.9 13.6 1.0
ND1 A:HIS1 2.0 6.4 1.0
N A:HIS1 2.3 3.0 1.0
CG A:HIS1 2.9 5.8 1.0
CE1 A:HIS144 2.9 13.4 1.0
CD2 A:HIS144 2.9 13.7 1.0
CE1 A:HIS1 3.0 6.3 1.0
CA A:HIS1 3.2 3.0 1.0
CB A:HIS1 3.2 3.3 1.0
CB A:ALA142 3.4 8.8 1.0
CZ A:PHE225 3.8 4.4 1.0
CG A:HIS144 4.1 12.4 1.0
ND1 A:HIS144 4.1 14.2 1.0
CD2 A:HIS1 4.1 7.5 1.0
NE2 A:HIS1 4.1 7.1 1.0
CE1 A:PHE225 4.3 5.7 1.0
OE1 A:GLU223 4.4 48.8 1.0
C A:HIS1 4.5 6.4 1.0
CE2 A:PHE225 4.6 5.8 1.0
CA A:ALA142 4.6 8.4 1.0
O A:ALA142 4.7 12.6 1.0
O A:HIS1 4.7 7.2 1.0
NH1 A:ARG217 4.9 17.0 1.0
C A:ALA142 4.9 13.8 1.0

Zinc binding site 2 out of 2 in 4x29

Go back to Zinc Binding Sites List in 4x29
Zinc binding site 2 out of 2 in the Structural Basis For the Enhancement of Virulence By Entomopoxvirus Fusolin and Its in Vivo Crystallization Into Viral Spindles (Complex with Zinc)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structural Basis For the Enhancement of Virulence By Entomopoxvirus Fusolin and Its in Vivo Crystallization Into Viral Spindles (Complex with Zinc) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn402

b:96.1
occ:1.00
NE2 A:HIS314 2.3 42.5 1.0
NE2 A:HIS312 2.4 44.5 1.0
CE1 A:HIS314 2.8 42.2 1.0
CE1 A:HIS312 2.8 44.1 1.0
O A:HOH664 2.9 31.4 1.0
CD2 A:HIS314 3.6 42.8 1.0
CD2 A:HIS312 3.7 44.4 1.0
ND1 A:HIS314 4.1 42.8 1.0
ND1 A:HIS312 4.1 44.3 1.0
CG A:HIS314 4.4 40.4 1.0
CG A:HIS312 4.5 41.9 1.0

Reference:

E.Chiu, M.Hijnen, R.Bunker, M.Boudes, C.Rajendran, K.Aizel, V.Olieric, C.Schulze-Briese, W.Mitsuhashi, V.Young, V.Ward, M.Bergoin, P.Metcalf, F.Coulibaly. Structural Basis For the Enhancement of Virulence By Viral Spindles and Their in Vivo Crystallization Proc.Natl.Acad.Sci.Usa 2015.
ISSN: ESSN 1091-6490
Page generated: Wed Dec 16 05:52:32 2020

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