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Zinc in PDB 4wur: The Crystal Structure of the Mers-Cov Papain-Like Protease (C111S) with Human Ubiquitin

Enzymatic activity of The Crystal Structure of the Mers-Cov Papain-Like Protease (C111S) with Human Ubiquitin

All present enzymatic activity of The Crystal Structure of the Mers-Cov Papain-Like Protease (C111S) with Human Ubiquitin:
3.4.19.12; 3.4.22.69;

Protein crystallography data

The structure of The Crystal Structure of the Mers-Cov Papain-Like Protease (C111S) with Human Ubiquitin, PDB code: 4wur was solved by J.Lei, R.Hilgenfeld, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.88 / 3.16
Space group P 63
Cell size a, b, c (Å), α, β, γ (°) 138.144, 138.144, 57.591, 90.00, 90.00, 120.00
R / Rfree (%) 20.8 / 25.2

Zinc Binding Sites:

The binding sites of Zinc atom in the The Crystal Structure of the Mers-Cov Papain-Like Protease (C111S) with Human Ubiquitin (pdb code 4wur). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the The Crystal Structure of the Mers-Cov Papain-Like Protease (C111S) with Human Ubiquitin, PDB code: 4wur:

Zinc binding site 1 out of 1 in 4wur

Go back to Zinc Binding Sites List in 4wur
Zinc binding site 1 out of 1 in the The Crystal Structure of the Mers-Cov Papain-Like Protease (C111S) with Human Ubiquitin


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The Crystal Structure of the Mers-Cov Papain-Like Protease (C111S) with Human Ubiquitin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn403

b:0.2
occ:1.00
SG A:CYS226 2.3 0.9 1.0
SG A:CYS194 2.3 0.3 1.0
SG A:CYS228 2.7 0.2 1.0
CB A:CYS226 2.8 0.5 1.0
SG A:CYS191 2.9 0.2 1.0
CB A:CYS194 3.3 0.6 1.0
CB A:CYS191 3.4 0.0 1.0
CB A:CYS228 3.9 0.7 1.0
CG2 A:VAL193 3.9 0.5 1.0
N A:CYS194 4.1 0.7 1.0
CA A:CYS226 4.2 0.2 1.0
CA A:CYS194 4.4 0.9 1.0
N A:CYS228 4.4 0.1 1.0
N A:GLN227 4.6 0.9 1.0
C A:CYS226 4.7 0.3 1.0
CA A:CYS228 4.8 0.8 1.0
CA A:CYS191 4.9 0.5 1.0

Reference:

J.Lei, R.Hilgenfeld. The Crystal Structure of the Mers-Cov Papain-Like Protease (C111S) with Human Ubiquitin To Be Published.
Page generated: Sun Oct 27 10:05:54 2024

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