Atomistry » Zinc » PDB 4qqr-4r5t » 4r5a
Atomistry »
  Zinc »
    PDB 4qqr-4r5t »
      4r5a »

Zinc in PDB 4r5a: A Carbonic Anhydrase IX Mimic in Complex with A Carbohydrate-Based Sulfamate

Enzymatic activity of A Carbonic Anhydrase IX Mimic in Complex with A Carbohydrate-Based Sulfamate

All present enzymatic activity of A Carbonic Anhydrase IX Mimic in Complex with A Carbohydrate-Based Sulfamate:
4.2.1.1;

Protein crystallography data

The structure of A Carbonic Anhydrase IX Mimic in Complex with A Carbohydrate-Based Sulfamate, PDB code: 4r5a was solved by B.P.Mahon, R.Mckenna, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.96 / 1.64
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 42.038, 41.429, 72.259, 90.00, 103.79, 90.00
R / Rfree (%) 15.6 / 18.5

Zinc Binding Sites:

The binding sites of Zinc atom in the A Carbonic Anhydrase IX Mimic in Complex with A Carbohydrate-Based Sulfamate (pdb code 4r5a). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the A Carbonic Anhydrase IX Mimic in Complex with A Carbohydrate-Based Sulfamate, PDB code: 4r5a:

Zinc binding site 1 out of 1 in 4r5a

Go back to Zinc Binding Sites List in 4r5a
Zinc binding site 1 out of 1 in the A Carbonic Anhydrase IX Mimic in Complex with A Carbohydrate-Based Sulfamate


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of A Carbonic Anhydrase IX Mimic in Complex with A Carbohydrate-Based Sulfamate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn301

b:10.8
occ:1.00
NE2 A:HIS94 2.0 8.6 1.0
ND1 A:HIS119 2.0 7.1 1.0
NE2 A:HIS96 2.0 8.2 1.0
NAA A:3J4303 2.2 9.9 1.0
CE1 A:HIS119 2.9 7.8 1.0
CD2 A:HIS94 3.0 10.8 1.0
CD2 A:HIS96 3.0 10.4 1.0
CE1 A:HIS94 3.0 11.5 1.0
CE1 A:HIS96 3.1 10.2 1.0
SAW A:3J4303 3.1 10.0 1.0
CG A:HIS119 3.1 7.4 1.0
OAB A:3J4303 3.2 11.2 1.0
CB A:HIS119 3.6 8.7 1.0
OAO A:3J4303 3.8 13.2 1.0
OE1 A:GLU106 3.9 10.1 1.0
OG1 A:THR199 3.9 8.9 1.0
NE2 A:HIS119 4.1 9.5 1.0
ND1 A:HIS94 4.1 10.8 1.0
CG A:HIS94 4.1 8.4 1.0
CG A:HIS96 4.2 9.5 1.0
ND1 A:HIS96 4.2 9.3 1.0
OAC A:3J4303 4.2 9.8 1.0
CAM A:3J4303 4.2 14.7 1.0
CD2 A:HIS119 4.2 11.2 1.0
CAP A:3J4303 4.5 14.0 1.0
CD A:GLU106 4.8 11.3 1.0
NAV A:3J4303 4.9 15.9 1.0

Reference:

J.Moeker, B.P.Mahon, L.F.Bornaghi, D.Vullo, C.T.Supuran, R.Mckenna, S.A.Poulsen. Structural Insights Into Carbonic Anhydrase IX Isoform Specificity of Carbohydrate-Based Sulfamates. J.Med.Chem. V. 57 8635 2014.
ISSN: ISSN 0022-2623
PubMed: 25254302
DOI: 10.1021/JM5012935
Page generated: Sun Oct 27 06:52:55 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy