Atomistry » Zinc » PDB 4qqr-4r5t » 4r59
Atomistry »
  Zinc »
    PDB 4qqr-4r5t »
      4r59 »

Zinc in PDB 4r59: A Carbonic Anhydrase IX Mimic in Complex with A Carbohydrate-Based Sulfamate

Enzymatic activity of A Carbonic Anhydrase IX Mimic in Complex with A Carbohydrate-Based Sulfamate

All present enzymatic activity of A Carbonic Anhydrase IX Mimic in Complex with A Carbohydrate-Based Sulfamate:
4.2.1.1;

Protein crystallography data

The structure of A Carbonic Anhydrase IX Mimic in Complex with A Carbohydrate-Based Sulfamate, PDB code: 4r59 was solved by B.P.Mahon, R.Mckenna, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.88 / 1.65
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 41.953, 41.224, 71.951, 90.00, 103.84, 90.00
R / Rfree (%) 15.7 / 20.5

Zinc Binding Sites:

The binding sites of Zinc atom in the A Carbonic Anhydrase IX Mimic in Complex with A Carbohydrate-Based Sulfamate (pdb code 4r59). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the A Carbonic Anhydrase IX Mimic in Complex with A Carbohydrate-Based Sulfamate, PDB code: 4r59:

Zinc binding site 1 out of 1 in 4r59

Go back to Zinc Binding Sites List in 4r59
Zinc binding site 1 out of 1 in the A Carbonic Anhydrase IX Mimic in Complex with A Carbohydrate-Based Sulfamate


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of A Carbonic Anhydrase IX Mimic in Complex with A Carbohydrate-Based Sulfamate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn300

b:12.7
occ:1.00
NE2 A:HIS94 2.0 12.2 1.0
ND1 A:HIS119 2.0 11.8 1.0
NE2 A:HIS96 2.1 11.8 1.0
NAA A:3J3302 2.2 14.1 0.6
NAA A:3J3302 2.2 12.1 0.4
CE1 A:HIS119 2.9 10.6 1.0
OAB A:3J3302 2.9 17.4 0.4
OAC A:3J3302 2.9 15.5 0.6
CD2 A:HIS94 2.9 11.9 1.0
CD2 A:HIS96 3.0 11.7 1.0
CE1 A:HIS94 3.0 12.1 1.0
CE1 A:HIS96 3.1 12.0 1.0
SAX A:3J3302 3.1 21.5 0.4
SAX A:3J3302 3.1 14.8 0.6
CG A:HIS119 3.1 10.5 1.0
CB A:HIS119 3.6 10.1 1.0
O A:HOH583 3.7 26.3 1.0
OAB A:3J3302 3.8 20.7 0.6
OG1 A:THR198 3.9 10.0 1.0
OE1 A:GLU106 4.0 10.6 1.0
OAC A:3J3302 4.0 19.4 0.4
NE2 A:HIS119 4.1 10.1 1.0
CG A:HIS94 4.1 7.9 1.0
ND1 A:HIS94 4.1 12.1 1.0
CG A:HIS96 4.2 10.5 1.0
ND1 A:HIS96 4.2 12.1 1.0
OAP A:3J3302 4.2 27.4 0.6
CD2 A:HIS119 4.2 10.9 1.0
OAP A:3J3302 4.3 32.5 0.4
O A:HOH590 4.8 33.6 1.0
CAQ A:3J3302 4.8 30.2 0.4
CD A:GLU106 4.9 11.0 1.0

Reference:

J.Moeker, B.P.Mahon, L.F.Bornaghi, D.Vullo, C.T.Supuran, R.Mckenna, S.A.Poulsen. Structural Insights Into Carbonic Anhydrase IX Isoform Specificity of Carbohydrate-Based Sulfamates. J.Med.Chem. V. 57 8635 2014.
ISSN: ISSN 0022-2623
PubMed: 25254302
DOI: 10.1021/JM5012935
Page generated: Sun Oct 27 06:52:55 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy