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Zinc in PDB 4oy2: Crystal Structure of TAF1-TAF7, A Tfiid Subcomplex

Enzymatic activity of Crystal Structure of TAF1-TAF7, A Tfiid Subcomplex

All present enzymatic activity of Crystal Structure of TAF1-TAF7, A Tfiid Subcomplex:
2.3.1.48;

Protein crystallography data

The structure of Crystal Structure of TAF1-TAF7, A Tfiid Subcomplex, PDB code: 4oy2 was solved by S.Bhattacharya, X.Lou, K.Rajashankar, R.H.Jacobson, P.Webb, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 83.68 / 2.90
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 122.215, 123.660, 229.610, 90.00, 90.00, 90.00
R / Rfree (%) 20.9 / 24.3

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of TAF1-TAF7, A Tfiid Subcomplex (pdb code 4oy2). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of TAF1-TAF7, A Tfiid Subcomplex, PDB code: 4oy2:

Zinc binding site 1 out of 1 in 4oy2

Go back to Zinc Binding Sites List in 4oy2
Zinc binding site 1 out of 1 in the Crystal Structure of TAF1-TAF7, A Tfiid Subcomplex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of TAF1-TAF7, A Tfiid Subcomplex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1001

b:0.6
occ:1.00
OD2 B:ASP109 3.5 91.7 1.0
O A:ILE643 3.7 82.2 1.0
OD1 B:ASP109 3.9 96.9 1.0
O B:LEU89 4.1 1.0 1.0
CG B:ASP109 4.1 91.0 1.0
CA A:GLY640 4.2 78.4 1.0
N A:GLY640 4.2 82.4 1.0
C A:ILE643 4.4 88.1 1.0
N B:LEU89 4.5 0.5 1.0
N A:ILE643 4.6 89.3 1.0
C A:GLY642 4.7 91.8 1.0
C B:LEU89 4.8 0.0 1.0
C A:GLY640 4.8 83.3 1.0
N A:GLY642 4.9 90.1 1.0
CB B:ARG88 4.9 0.8 1.0
N A:SER644 4.9 92.8 1.0
CA A:SER644 4.9 89.3 1.0
CA A:GLY642 4.9 88.6 1.0
CA B:ARG88 5.0 0.1 1.0

Reference:

S.Bhattacharya, X.Lou, P.Hwang, K.R.Rajashankar, X.Wang, J.-A.Gustafsson, R.J.Fletterick, R.H.Jacobson, P.Webb. Structural and Functional Insight Into TAF1-TAF7, A Subcomplex of Transcription Factor II D. Proc.Natl.Acad.Sci.Usa V. 111 9103 2014.
ISSN: ESSN 1091-6490
PubMed: 24927529
DOI: 10.1073/PNAS.1408293111
Page generated: Wed Dec 16 05:39:50 2020

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