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Zinc in PDB 4o5o: X-Ray Crystal Structure of A 3-Hydroxyacyl-Coa Dehydrogenase From Brucella Suis

Protein crystallography data

The structure of X-Ray Crystal Structure of A 3-Hydroxyacyl-Coa Dehydrogenase From Brucella Suis, PDB code: 4o5o was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.23 / 1.40
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 76.470, 92.240, 135.490, 90.00, 90.00, 90.00
R / Rfree (%) 13.6 / 16.9

Zinc Binding Sites:

The binding sites of Zinc atom in the X-Ray Crystal Structure of A 3-Hydroxyacyl-Coa Dehydrogenase From Brucella Suis (pdb code 4o5o). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the X-Ray Crystal Structure of A 3-Hydroxyacyl-Coa Dehydrogenase From Brucella Suis, PDB code: 4o5o:

Zinc binding site 1 out of 1 in 4o5o

Go back to Zinc Binding Sites List in 4o5o
Zinc binding site 1 out of 1 in the X-Ray Crystal Structure of A 3-Hydroxyacyl-Coa Dehydrogenase From Brucella Suis


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of X-Ray Crystal Structure of A 3-Hydroxyacyl-Coa Dehydrogenase From Brucella Suis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn301

b:22.1
occ:1.00
NE2 B:HIS-5 2.1 18.0 1.0
OE2 A:GLU235 2.1 16.8 1.0
NE2 A:HIS231 2.1 12.5 1.0
OE1 A:GLU235 2.2 15.1 1.0
NE2 A:HIS-4 2.2 20.6 1.0
NE2 B:HIS-3 2.2 16.1 1.0
CD A:GLU235 2.4 16.4 1.0
CE1 B:HIS-5 3.1 23.5 1.0
CE1 A:HIS231 3.1 15.6 1.0
CD2 A:HIS231 3.1 12.6 1.0
CD2 B:HIS-5 3.1 25.4 1.0
CD2 A:HIS-4 3.2 24.2 1.0
CD2 B:HIS-3 3.2 19.3 1.0
CE1 A:HIS-4 3.2 24.8 1.0
CE1 B:HIS-3 3.2 20.6 1.0
CG A:GLU235 3.9 12.9 1.0
ND1 B:HIS-5 4.2 24.6 1.0
ND1 A:HIS231 4.2 14.6 1.0
O A:HOH673 4.2 26.4 1.0
CG B:HIS-5 4.3 24.5 1.0
CG A:HIS231 4.3 9.7 1.0
ND1 A:HIS-4 4.3 24.2 1.0
ND1 B:HIS-3 4.3 20.3 1.0
CG A:HIS-4 4.3 25.6 1.0
O A:HOH505 4.3 20.2 1.0
CG B:HIS-3 4.3 19.2 1.0
O A:HOH522 4.7 19.4 1.0
CG2 A:ILE3 4.8 27.8 1.0
CB A:GLU235 4.9 11.1 1.0

Reference:

J.W.Fairman, J.Abendroth, T.E.Edwards, D.Lorimer. X-Ray Crystal Structure of A 3-Hydroxyacyl-Coa Dehydrogenase From Brucella Suis To Be Published.
Page generated: Wed Dec 16 05:38:09 2020

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