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Zinc in PDB 4mah: Structure of Aspergillus Oryzae AA11 Lytic Polysaccharide Monooxygenase with Zn

Protein crystallography data

The structure of Structure of Aspergillus Oryzae AA11 Lytic Polysaccharide Monooxygenase with Zn, PDB code: 4mah was solved by G.R.Hemsworth, B.Henrissat, P.H.Walton, G.J.Davies, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.07 / 1.55
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 55.207, 61.498, 65.136, 90.00, 90.00, 90.00
R / Rfree (%) 13.2 / 16.6

Other elements in 4mah:

The structure of Structure of Aspergillus Oryzae AA11 Lytic Polysaccharide Monooxygenase with Zn also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of Aspergillus Oryzae AA11 Lytic Polysaccharide Monooxygenase with Zn (pdb code 4mah). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of Aspergillus Oryzae AA11 Lytic Polysaccharide Monooxygenase with Zn, PDB code: 4mah:

Zinc binding site 1 out of 1 in 4mah

Go back to Zinc Binding Sites List in 4mah
Zinc binding site 1 out of 1 in the Structure of Aspergillus Oryzae AA11 Lytic Polysaccharide Monooxygenase with Zn


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of Aspergillus Oryzae AA11 Lytic Polysaccharide Monooxygenase with Zn within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn301

b:20.7
occ:1.00
NE2 A:HIS60 2.0 19.7 1.0
ND1 A:HIS1 2.0 15.4 1.0
N A:HIS1 2.1 16.6 1.0
CE1 A:HIS60 2.9 32.4 1.0
CE1 A:HIS1 3.0 19.0 1.0
CG A:HIS1 3.0 15.4 1.0
CA A:HIS1 3.0 13.5 1.0
CD2 A:HIS60 3.0 20.6 1.0
CB A:HIS1 3.3 18.2 1.0
OH A:TYR140 3.8 16.6 1.0
CB A:ALA58 3.9 19.5 1.0
ND1 A:HIS60 4.0 34.6 1.0
NE2 A:HIS1 4.1 22.4 1.0
CG A:HIS60 4.1 21.5 1.0
CD2 A:HIS1 4.1 19.4 1.0
O A:ALA58 4.2 17.0 1.0
C A:HIS1 4.4 14.3 1.0
CA A:ALA58 4.7 16.9 1.0
O A:HIS1 4.8 17.9 1.0
N A:ALA58 4.8 18.2 1.0
C A:ALA58 4.8 16.1 1.0
OG A:SER57 4.8 19.1 1.0
O A:HOH507 4.9 35.9 1.0
CZ A:TYR140 5.0 14.1 1.0

Reference:

G.R.Hemsworth, B.Henrissat, G.J.Davies, P.H.Walton. Discovery and Characterization of A New Family of Lytic Polysaccharide Monooxygenases. Nat.Chem.Biol. V. 10 122 2014.
ISSN: ISSN 1552-4450
PubMed: 24362702
DOI: 10.1038/NCHEMBIO.1417
Page generated: Sun Oct 27 02:18:07 2024

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