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Zinc in PDB 4g77: Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Tolfenamic Acid at 1.98 A Resolution

Protein crystallography data

The structure of Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Tolfenamic Acid at 1.98 A Resolution, PDB code: 4g77 was solved by P.K.Shukla, L.Gautam, M.Sinha, P.Kaur, S.Sharma, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 62.51 / 1.98
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 62.624, 49.869, 65.451, 90.00, 107.25, 90.00
R / Rfree (%) 16 / 21.1

Other elements in 4g77:

The structure of Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Tolfenamic Acid at 1.98 A Resolution also contains other interesting chemical elements:

Iron (Fe) 1 atom
Chlorine (Cl) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Tolfenamic Acid at 1.98 A Resolution (pdb code 4g77). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Tolfenamic Acid at 1.98 A Resolution, PDB code: 4g77:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 4g77

Go back to Zinc Binding Sites List in 4g77
Zinc binding site 1 out of 2 in the Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Tolfenamic Acid at 1.98 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Tolfenamic Acid at 1.98 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn704

b:25.5
occ:1.00
OE2 A:GLU659 2.1 27.1 1.0
OE1 A:GLU659 2.3 20.0 1.0
CD A:GLU659 2.5 22.6 1.0
O A:GLY653 3.8 30.0 1.0
CG A:GLU659 4.1 22.1 1.0
O A:ARG654 4.3 21.1 1.0
CA A:PRO655 4.6 21.1 1.0
O A:HOH890 4.7 52.5 1.0
N A:THR656 4.7 19.4 1.0
CB A:GLU659 4.8 19.9 1.0
C A:ARG654 4.9 24.1 1.0
C A:GLY653 5.0 28.5 1.0

Zinc binding site 2 out of 2 in 4g77

Go back to Zinc Binding Sites List in 4g77
Zinc binding site 2 out of 2 in the Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Tolfenamic Acid at 1.98 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Tolfenamic Acid at 1.98 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn705

b:29.2
occ:1.00
CL A:TLF711 1.8 45.4 1.0
NE2 A:HIS588 2.1 23.4 1.0
C2 A:TLF711 2.7 42.7 1.0
C3 A:TLF711 2.9 47.0 1.0
CE1 A:HIS588 3.0 24.9 1.0
CD2 A:HIS588 3.1 23.6 1.0
O A:HOH862 3.8 25.6 1.0
C1 A:TLF711 4.0 47.3 1.0
ND1 A:HIS588 4.1 24.7 1.0
CG2 A:VAL591 4.2 24.5 1.0
CG A:HIS588 4.2 21.3 1.0
C4 A:TLF711 4.3 43.0 1.0
C17 A:TLF711 4.6 49.2 1.0
O A:HOH824 4.7 24.6 1.0

Reference:

P.K.Shukla, L.Gautam, M.Sinha, P.Kaur, S.Sharma, T.P.Singh. Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Tolfenamic Acid at 1.98 A Resolution To Be Published.
Page generated: Wed Dec 16 05:19:03 2020

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