Zinc in PDB 4eog: Crystal Structure of CSX1 of Pyrococcus Furiosus

The structure of Crystal Structure of CSX1 of Pyrococcus Furiosus, PDB code: 4eog was solved by Y.K.Kim, B.H.Oh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.08 / 2.30
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	51.820, 179.530, 110.590, 90.00, 90.00, 90.00
R / Rfree (%)	22.7 / 25

The binding sites of Zinc atom in the Crystal Structure of CSX1 of Pyrococcus Furiosus (pdb code 4eog). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 3 binding sites of Zinc where determined in the Crystal Structure of CSX1 of Pyrococcus Furiosus, PDB code: 4eog:
Jump to Zinc binding site number: 1; 2; 3;

Zinc binding site 1 out of 3 in the Crystal Structure of CSX1 of Pyrococcus Furiosus


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of CSX1 of Pyrococcus Furiosus within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn501 b:0.0 occ:1.00 OE2 A:GLU288 3.5 56.5 1.0 OE1 A:GLU288 3.8 56.6 1.0 CD A:GLU288 4.0 55.0 1.0

Zinc binding site 2 out of 3 in the Crystal Structure of CSX1 of Pyrococcus Furiosus


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of CSX1 of Pyrococcus Furiosus within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn502 b:0.1 occ:1.00 CE1 A:HIS436 2.7 49.5 1.0 NE2 A:HIS436 3.1 47.9 1.0 O A:HOH666 3.6 45.1 1.0 ND1 A:HIS436 3.8 48.1 1.0 OD1 A:ASN432 4.0 46.0 1.0 CG A:ASN432 4.1 45.5 1.0 CB A:ASN432 4.2 41.1 1.0 CD2 A:HIS436 4.4 46.5 1.0 CG A:HIS436 4.7 45.5 1.0 OE2 A:GLU440 4.8 65.3 1.0 ND2 A:ASN432 4.8 46.8 1.0 CE2 A:TYR441 4.8 71.7 1.0 OE1 A:GLU440 4.9 67.6 1.0

Zinc binding site 3 out of 3 in the Crystal Structure of CSX1 of Pyrococcus Furiosus


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Crystal Structure of CSX1 of Pyrococcus Furiosus within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn503 b:57.2 occ:1.00 OE1 A:GLU283 2.2 43.6 1.0 OE1 A:GLU297 2.4 37.7 1.0 OE2 A:GLU297 2.5 35.0 1.0 CD A:GLU297 2.8 35.5 1.0 CD A:GLU283 3.2 43.7 1.0 OE2 A:GLU283 3.9 44.5 1.0 CG A:GLU283 4.1 39.7 1.0 CG A:GLU297 4.3 32.1 1.0

Y.K.Kim, Y.G.Kim, B.H.Oh. Crystal Structure and Nucleic Acid-Binding Activity of the Crispr-Associated Protein CSX1 of Pyrococcus Furiosus. Proteins V. 81 261 2013.
ISSN: ISSN 0887-3585
PubMed: 22987782
DOI: 10.1002/PROT.24183